# Natural CCD2 Variants and RNA Interference for Boosting Crocin Biosynthesis in Tomato

**Authors:** Elena Moreno-Giménez, Eduardo Parreño, Lucía Morote, Alberto José López Jiménez, Cristian Martínez Fajardo, Silvia Presa, Ángela Rubio-Moraga, Antonio Granell, Oussama Ahrazem, Lourdes Gómez-Gómez

PMC · DOI: 10.3390/biology14070850 · 2025-07-12

## TL;DR

Scientists engineered tomatoes to produce high levels of crocins, health-boosting compounds, by introducing specific genes and using RNA interference.

## Contribution

The study introduces natural CCD2 variants and RNA interference to significantly enhance crocin biosynthesis in tomatoes.

## Key findings

- Transgenic tomatoes with saffron CCD2 produced crocins at 4.7 mg/g dry weight.
- Crocosmia CCD2 also resulted in crocins at 2.1 mg/g dry weight.
- RNA interference increased zeaxanthin levels, improving crocin production.

## Abstract

This study addresses the challenge of producing crocins, which are natural compounds with strong antioxidant and anti-inflammatory benefits for human health. Currently, few plants make crocins in large amounts, making them hard to grow in large quantities. The goal of this research was to use genetic engineering to create tomatoes that can produce high levels of crocins, offering a new, sustainable source of these valuable nutrients. Spe-cific genes from saffron and a plant called Crocosmia were introduced into tomatoes, along with a gene to boost the production of crocins by increasing the levels of zeaxanthin, a natural pigment needed for their production. As a result, the genetically modified toma-toes produced crocins at significantly high levels. This study shows that selecting the right versions of key enzymes can greatly improve efficiency in producing health-boosting compounds in everyday crops.

Crocin biosynthesis involves a complex network of enzymes with biosynthetic and modifier enzymes, and the manipulation of these pathways holds promise for improving human health through the broad exploitation of these bioactive metabolites. Crocins play a significant role in human nutrition and health, as they exhibit antioxidant and anti-inflammatory activity. Plants that naturally accumulate high levels of crocins are scarce, and the production of crocins is highly limited by the characteristics of the crops and their yield. The CCD2 enzyme, initially identified in saffron, is responsible for converting zeaxanthin into crocetin, which is further modified to crocins by aldehyde dehydrogenases and glucosyltransferase enzymes. Crops like tomato fruits, which naturally contain high levels of carotenoids, offer valuable genetic resources for expanding synthetic biology tools. In an effort to explore CCD2 enzymes with improved activity, two CCD2 alleles from saffron and Crocosmia were introduced into tomato, together with a UGT gene. Furthermore, in order to increase the zeaxanthin pool in the fruit, an RNA interference construct was introduced to limit the conversion of zeaxanthin to violaxanthin. The expression of saffron CCD2, CsCCDD2L, led to the creation of transgenic tomatoes with significantly high crocins levels, reaching concentrations of 4.7 mg/g dry weight. The Crocosmia allele, CroCCD2, also resulted in high crocins levels, reaching a concentration of 2.1 mg/g dry weight. These findings underscore the importance of enzyme variants in synthetic biology, as they enable the development of crops rich in beneficial apocarotenoids.

## Linked entities

- **Genes:** CCD2 (epoxycarotenoid cleavage enzyme fused with transferase) [NCBI Gene 9681844], SLC35A2 (solute carrier family 35 member A2) [NCBI Gene 7355]
- **Proteins:** CCD2 (epoxycarotenoid cleavage enzyme fused with transferase)
- **Chemicals:** crocin (PubChem CID 5281233), zeaxanthin (PubChem CID 5280899), crocetin (PubChem CID 5281232), violaxanthin (PubChem CID 448438)
- **Species:** Solanum lycopersicum (taxon 4081), Crocus sativus (taxon 82528), Crocosmia (taxon 58947)

## Full-text entities

- **Diseases:** inflammatory (MESH:D007249)
- **Chemicals:** Crocin (MESH:C029036), crocetin (MESH:C487773), carotenoids (MESH:D002338), apocarotenoids (-), zeaxanthin (MESH:D065146), violaxanthin (MESH:C005613)
- **Species:** Solanum lycopersicum (tomato, species) [taxon 4081], Crocosmia (genus) [taxon 58947], Homo sapiens (human, species) [taxon 9606]

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12292393/full.md

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Source: https://tomesphere.com/paper/PMC12292393