# Machine learning integrates region-specific microbial signatures to distinguish geographically adjacent populations within a province

**Authors:** Li Luo, Bangwei Chen, Shengyin Zeng, Yaxin Li, Xiaolin Chen, Jianguo Zhang, Xiangjie Guo, Shujin Li, Lei Ruan, Shida Zhu, Cairong Gao, Cuntai Zhang, Tao Li

PMC · DOI: 10.3389/fmicb.2025.1586195 · Frontiers in Microbiology · 2025-07-11

## Full-text entities

- **Genes:** GPT (glutamic--pyruvic transaminase) [NCBI Gene 2875] {aka AAT1, ALT, ALT1, GPT1, SGPT}
- **Diseases:** cancer (MESH:D009369), anxiety (MESH:D001007), asthma (MESH:D001249), -related diseases (MESH:D000077733), cardiovascular, or (MESH:D002318), inflammatory bowel disease (MESH:D015212), depression (MESH:D003866), liver dysfunction (MESH:D017093)
- **Chemicals:** Pyruvate (MESH:D019289), fiber (MESH:D004043), Lactate (MESH:D019344), isobutanol (MESH:C040507), cholesterol (MESH:D002784), bile acids (MESH:D001647), 5-aminoimidazole ribonucleotide (-), amino acid (MESH:D000596), carbohydrate (MESH:D002241), purine (MESH:C030985), nucleoside (MESH:D009705), lipid (MESH:D008055), alcohol (MESH:D000438), uridine monophosphate (MESH:D014542), SCFA (MESH:D005232)
- **Species:** Bifidobacterium longum (species) [taxon 216816], Escherichia coli (E. coli, species) [taxon 562], Lachnoclostridium (genus) [taxon 1506553], Alistipes putredinis (species) [taxon 28117], Mediterraneibacter gnavus (species) [taxon 33038], Eubacterium (genus) [taxon 1730], Klebsiella quasipneumoniae (species) [taxon 1463165], Veillonella (genus) [taxon 29465], Enterocloster bolteae (species) [taxon 208479], Parabacteroides distasonis (species) [taxon 823], Bacteroides ovatus (species) [taxon 28116], Ruminococcus bicirculans (ex Wegman et al. 2014) (species) [taxon 1160721], Bacteroides uniformis (species) [taxon 820], Eggerthella lenta (species) [taxon 84112], [Clostridium] innocuum (species) [taxon 1522], Bacteroides thetaiotaomicron (species) [taxon 818], Bacteroides stercoris (species) [taxon 46506], Chiroptera (bats, order) [taxon 9397], Hungatella hathewayi (species) [taxon 154046], Blautia wexlerae (species) [taxon 418240], Segatella copri (species) [taxon 165179], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Rattus norvegicus (brown rat, species) [taxon 10116], [Clostridium] symbiosum (species) [taxon 1512], Homo sapiens (human, species) [taxon 9606], Faecalibacterium prausnitzii (species) [taxon 853], Bacillota (clostridial firmicutes, phylum) [taxon 1239], Mediterraneibacter faecis (species) [taxon 592978], Enterocloster aldenensis (species) [taxon 358742], Phocaeicola vulgatus (species) [taxon 821], Anaerostipes (genus) [taxon 207244], Streptococcus salivarius (species) [taxon 1304], Bacteroidia (class) [taxon 200643], Flavonifractor plautii (species) [taxon 292800]

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## References

72 references — full list in the complete paper: https://tomesphere.com/paper/PMC12289627/full.md

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Source: https://tomesphere.com/paper/PMC12289627