# Targeting USP42 induces DNA damage and inhibits cell growth in prostate cancer

**Authors:** Yinghao Zhou, Chenchen Chen, Yibo Meng, Jianchao Ge, Shengkui Meng, Xillong Wang, Yaozong Xu, Guowei Shi, Wandong Yu, Xuetao Hu, Jun Zhang

PMC · DOI: 10.3389/fmolb.2025.1646331 · Frontiers in Molecular Biosciences · 2025-07-11

## TL;DR

This study shows that targeting USP42, a protein linked to prostate cancer growth, can reduce tumor growth and improve treatment effectiveness when combined with olaparib.

## Contribution

The study identifies USP42 as a novel target in prostate cancer and demonstrates its role in DNA repair and response to therapy.

## Key findings

- USP42 inhibition significantly reduces prostate cancer cell growth in vitro and in vivo.
- USP42 is overexpressed in prostate cancer tissues compared to normal tissues.
- USP42 knockdown enhances the effectiveness of olaparib in suppressing tumor growth.

## Abstract

Prostate cancer (PCa) is one of the most common cancers in men worldwide. During its progression, deubiquitination-mediated alterations in biological processes play critical roles in tumor metabolism, stem cell characteristics, immune evasion, DNA damage repair, and chemoresistance. A comprehensive investigation of the deubiquitinases involved in PCa development holds significant clinical value as regards inhibiting tumor growth and overcoming drug resistance.

Clinical databases were analyzed to identify differentially expressed deubiquitinases in PCa. Immunohistochemical analysis of PCa samples was used to evaluate USP42 expression in normal and tumor tissues. The effects of USP42 inhibition on PCa cell proliferation were assessed both in vitro and in vivo through MTT assays, colony-formation assays, and a subcutaneous xenograft tumor model in nude mice. The regulation of USP42 expression by the androgen receptor (AR) was investigated by culturing cells in low-androgen medium, modulating AR expression, and analyzing protein expression correlations through immunohistochemical staining of clinical samples and database analysis. The potential mechanisms underlying USP42-mediated effects on PCa cell proliferation were explored using RNA sequencing and data-independent acquisition proteomics. In addition, γ-H2A.X detection, MTT assays, and colony-formation assays were conducted to evaluate the impacts of USP42 inhibition on DNA damage repair and the therapeutic efficacy of olaparib in PCa cells.

Knockdown of USP42 significantly reduced PCa cell growth both in vitro and in vivo. USP42 expression was elevated in PCa tissues compared with normal tissues. Further investigation confirmed that AR positively regulated USP42 mRNA and protein expression in PCa cells. Mechanistically, USP42 inhibition induced significant defects in DNA damage repair. Moreover, USP42 knockdown markedly enhanced the tumor-suppressive effects of olaparib when used in combination.

## Linked entities

- **Genes:** USP42 (ubiquitin specific peptidase 42) [NCBI Gene 84132], AR (androgen receptor) [NCBI Gene 367]
- **Proteins:** USP42 (ubiquitin specific peptidase 42), H2AXA (Histone superfamily protein)
- **Chemicals:** olaparib (PubChem CID 23725625)
- **Diseases:** prostate cancer (MONDO:0005159)

## Full-text entities

- **Genes:** AR (androgen receptor) [NCBI Gene 367] {aka AIS, AR8, DHTR, HPCX3, HUMARA, HYSP1}, USP42 (ubiquitin specific peptidase 42) [NCBI Gene 84132]
- **Diseases:** PCa (MESH:D011471), cancers (MESH:D009369)
- **Chemicals:** MTT (MESH:C070243), olaparib (MESH:C531550)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12289470/full.md

## References

28 references — full list in the complete paper: https://tomesphere.com/paper/PMC12289470/full.md

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Source: https://tomesphere.com/paper/PMC12289470