# Prolonged apnea in a boy with epilepsy and a novel gain-of-function missense CACNA1A variant indicating SUDEP risk

**Authors:** Simone Pelizzari, Marta Campiglio, Yousra El Ghaleb, Tatjana Bierhals, Maja Hempel, Jonas Denecke, Bernhard E. Flucher, Jessika Johannsen

PMC · DOI: 10.3389/fneur.2025.1582548 · 2025-07-09

## TL;DR

A 9-year-old boy with a new CACNA1A gene variant experienced severe seizures and apnea, indicating a high risk of SUDEP.

## Contribution

A novel de novo missense CACNA1A variant is linked to SUDEP risk through gain-of-function calcium channel activity.

## Key findings

- A novel CACNA1A variant (p.Phe1800Ile) was identified in a boy with epilepsy and prolonged apnea.
- Functional analysis showed the variant causes a gain-of-function in the calcium channel.
- The findings suggest an increased SUDEP risk in CACNA1A-associated epilepsy.

## Abstract

The CACNA1A gene encodes the pore-forming subunit of the Cav2.1 (P/Q type) neuronal calcium channel and pathogenic variants cause a variety of neurological disorders including episodic and congenital ataxia, familial hemiplegic migraine, developmental delay and epilepsy. Multiple types of seizures have been described in affected patients, including status epilepticus as the first manifestation. In mice harboring the homozygous gain-of-function variant p.Ser218Leu, seizures leading to SUDEP triggered by brainstem spreading depolarization with subsequent apnea and cardiac arrest have been reported.

Clinical, genetic and functional data are presented.

The 9-year-old boy with global developmental delay and congenital ataxia developed recurrent seizures and status epilepticus with prolonged, life-threatening apnea implying a high risk for SUDEP. Genetic testing showed a novel de novo missense variant in CACNA1A (c.5398T>A, p.Phe1800Ile). Functional analysis revealed a gain of channel function as the molecular pathomechanism. Therefore, an increased risk of SUDEP in patients with CACNA1-associated epilepsy seems reasonable and preventive strategies should be discussed with caregivers.

## Linked entities

- **Genes:** CACNA1A (calcium voltage-gated channel subunit alpha1 A) [NCBI Gene 773]
- **Diseases:** epilepsy (MONDO:0005027)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** CACNA1A (calcium voltage-gated channel subunit alpha1 A) [NCBI Gene 773] {aka APCA, BI, CACNL1A4, CAV2.1, DEE42, EA2}
- **Diseases:** apnea (MESH:D001049), neurological disorders (MESH:D009461), congenital ataxia (MESH:D013132), familial hemiplegic migraine (MESH:D020325), developmental delay (MESH:D002658), epilepsy (MESH:D004827), episodic and congenital ataxia (MESH:C580065), status epilepticus (MESH:D013226), seizures (MESH:D012640), cardiac arrest (MESH:D006323), SUDEP (MESH:D000080485)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]
- **Mutations:** p.Ser218Leu, p.Phe1800Ile, c.5398T>A

## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12283298/full.md

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Source: https://tomesphere.com/paper/PMC12283298