Seeing is believing: Genome editing made easy with RUBY for educational purposes

William K Sexton; Yanhao Cheng; Bing Yang; Hemayet Ullah; Yiping Qi; Shunyuan Xiao

PMC · DOI:10.1093/plphys/kiaf265·July 23, 2025

Seeing is believing: Genome editing made easy with RUBY for educational purposes

William K Sexton, Yanhao Cheng, Bing Yang, Hemayet Ullah, Yiping Qi, Shunyuan Xiao

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Abstract

Linked entities

Genes, proteins, chemicals, diseases, species, mutations and cell lines named across the full text — each resolved to its canonical identifier and authoritative record.

Genes1

CP

Proteins1

Species5

Arabidopsis thaliana(mouse-ear cress · species)Agrobacterium tumefaciens(species)Nicotiana benthamiana(species)Escherichia coli(E. coli · species)Turnip crinkle virus(no rank)

Cell lines1

S2— Drosophila melanogaster (Fruit fly) · Spontaneously immortalized cell line

Chemicals4

betalain 2xRFP adenine tyrosine

Figures2

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Taxonomy

TopicsCRISPR and Genetic Engineering · Genetics, Bioinformatics, and Biomedical Research