# NEDD4-binding protein 1 suppresses hepatitis B virus replication by regulating viral RNAs

**Authors:** Nobuhiro Kobayashi, Saori Suzuki, Yuki Sakamoto, Rigel Suzuki, Kento Mori, Yume Kosugi, Tomoya Saito, Yuan Ma, Lihan Liang, Takuma Izumi, Kisho Noda, Daisuke Okuzaki, Yumi Kanegae, Sanae Hayashi, Yasuhito Tanaka, Atsuya Yamashita, Kohji Moriishi, Yoshiharu Matsuura, Osamu Takeuchi, Tomokazu Tamura, Akinobu Taketomi, Takasuke Fukuhara

PMC · DOI: 10.1099/jgv.0.002082 · The Journal of General Virology · 2025-03-20

## TL;DR

N4BP1, a newly discovered protein, suppresses hepatitis B virus replication by regulating viral RNAs, offering a potential new target for anti-HBV therapies.

## Contribution

N4BP1 is newly identified as a host factor that inhibits HBV replication through regulation of viral RNA.

## Key findings

- Overexpression of N4BP1 reduces core-associated HBV DNA levels in hepatocellular carcinoma cells.
- N4BP1 binds HBV pregenomic RNA and regulates both 3.5 and 2.4/2.1 kb HBV RNA.
- Knockdown or knockout of N4BP1 rescues HBV DNA levels, confirming its anti-HBV effect.

## Abstract

Chronic infection with hepatitis B virus (HBV) (chronic HBV infection) places patients at increased risk for liver cirrhosis and hepatocellular carcinoma. Although nucleos(t)ide analogues are mainly used for the treatment of HBV, they require long-term administration and may lead to the emergence of drug-resistant mutants. Therefore, to identify targets for the development of novel anti-HBV drugs, we screened for HBV-suppressive host factors using a plasmid expression library of RNA-binding proteins (RBPs). We tested the effect of 132 RBPs on HBV replication by ectopically expressing these proteins along with HBV in hepatocellular carcinoma and evaluated the intracellular capsid-associated HBV DNA level. Our screen identified NEDD4-binding protein 1 (N4BP1) as having an anti-HBV effect. In hepatocellular carcinoma cell lines transfected or infected with HBV, the overexpression of N4BP1 decreased core-associated HBV DNA levels, while knockdown or knockout of the gene encoding N4BP1 rescued core-associated HBV DNA levels. N4BP1 possesses the KH-like and RNase domains, and both were required for the anti-HBV effect of N4BP1. Additionally, we measured levels of HBV pregenomic RNA (pgRNA) and covalently closed circular DNA in the RBP-transfected cells and confirmed that N4BP1 binds pgRNA directly and regulates both the 3.5 and 2.4/2.1 kb HBV RNA. In summary, N4BP1 is a newly identified host factor able to counteract HBV production by regulating 3.5 and 2.1/2.4 kb HBV RNA.

## Linked entities

- **Genes:** N4BP1 (NEDD4 binding protein 1) [NCBI Gene 9683]
- **Proteins:** N4BP1 (NEDD4 binding protein 1)
- **Diseases:** hepatocellular carcinoma (MONDO:0007256)

## Full-text entities

- **Genes:** RBP4 (retinol binding protein 4) [NCBI Gene 5950] {aka MCOPCB10, RDCCAS}, N4BP1 (NEDD4 binding protein 1) [NCBI Gene 9683]
- **Diseases:** Chronic infection with (MESH:D000088562), HBV infection (MESH:D006509), hepatocellular carcinoma (MESH:D006528), liver cirrhosis (MESH:D008103)
- **Chemicals:** nucleos(t)ide (-)
- **Species:** Homo sapiens (human, species) [taxon 9606], Hepatitis B virus (no rank) [taxon 10407]

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12282332/full.md

## References

51 references — full list in the complete paper: https://tomesphere.com/paper/PMC12282332/full.md

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Source: https://tomesphere.com/paper/PMC12282332