# Biological characteristics of SARS-CoV-2 resistant populations by integrated gut microbiota sequencing, metabolomics, and proteomics: a cohort comparison study

**Authors:** Huachong Xu, Haoxuan Li, Junhao Xu, Yaoxin Chen, Li Deng, Xiaoyin Chen, Yinji Xu

PMC · DOI: 10.3389/fmed.2025.1593007 · 2025-07-07

## TL;DR

This study compares resistant and susceptible populations to SARS-CoV-2 using gut microbiota, metabolomics, and proteomics to identify potential biomarkers for resistance.

## Contribution

The study identifies a unique metabolic signature in SARS-CoV-2 resistant individuals involving phosphatidylinositol and Prevotella abundance.

## Key findings

- Resistant individuals show elevated serum phosphatidylinositol levels.
- Prevotella abundance is higher in the gut microbiota of resistant individuals.
- These findings suggest potential predictive biomarkers for SARS-CoV-2 resistance.

## Abstract

Most research reports on COVID-19 infections have focused on the correlation between the severity of the disease symptoms and immune deficits, while the mechanisms affecting the susceptibility to SARS-CoV-2 remain largely unknown. The study aimed to comprehensively analyze the differences in immunity, gut microbiota, metabolism, and proteomics between the SARS-CoV-2 resistant population and the susceptible population.

In this cohort comparison study, participants were rigorously selected based on inclusion and exclusion criteria in a continuous enrollment manner using combined questionnaires and clinical data, ultimately including 25 SARS-CoV-2 resistant volunteers versus 16 SARS-CoV-2 infected patients. The clinical information of the participants was recorded in detail, and fecal and blood samples were collected in a standardized manner for subsequent multi-omics analysis, including gut microbiota sequencing, metabolomics, and proteomics. This study has preliminarily elucidated the characteristics of the gut microbiota, serum metabolites, and serum proteins in the SARS-CoV-2 resistant population. It exhibits a unique metabolic signature characterized by elevated levels of serum phosphatidylinositol and the abundance of Prevotella, which may serve as a potential predictive biomarker for resistance to SARS-CoV-2.

Given the crucial role of phosphatidylinositol in cell membrane architecture and viral infectivity, this study provides a promising entry point for further research into the pathogenesis and prevention strategies of COVID-19.

## Linked entities

- **Diseases:** COVID-19 (MONDO:0100096), SARS-CoV-2 (MONDO:0100096)

## Full-text entities

- **Diseases:** COVID-19 (MESH:D000086382), immune deficits (MESH:D007154)
- **Chemicals:** phosphatidylinositol (MESH:D010716)
- **Species:** Prevotella (genus) [taxon 838], Severe acute respiratory syndrome coronavirus 2 (no rank) [taxon 2697049], Homo sapiens (human, species) [taxon 9606]

## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12277166/full.md

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Source: https://tomesphere.com/paper/PMC12277166