# OICR-41103 as a chemical probe for the DCAF1 WD40 domain

**Authors:** Serah W. Kimani, Mahmoud Noureldin, Brian Wilson, Laurent Hoffer, Stuart R. Green, Magdalena M. Szewczyk, Héctor González-Álvarez, Mohammed Mohammed, Manuel Chan, Chiara Krausser, Alice Shi Ming Li, Taraneh Hajian, Sarah Tucker, Dhananjay Joshi, Punit Saraon, Brigitte Thériault, Ji Sup Kim, Vijayaratnam Santhakumar, Peter Loppnau, Yanjun Li, Almagul Seitova, Aiping Dong, Taira Kiyota, Tobias Hammann, Paul Gehrtz, Bhashant Patel, Vaibhavi Rathod, Anand Vala, Bhimsen Rout, Paras Jagodra, Peter J. Brown, Ahmed Aman, Jailall Ramnauth, Gennady Poda, David Uehling, Cheryl H. Arrowsmith, Dalia Barsyte-Lovejoy, Richard Marcellus, Suzanne Ackloo, Ahmed Mamai, Rima Al-awar, Levon Halabelian

PMC · DOI: 10.1038/s42003-025-08491-0 · 2025-07-19

## TL;DR

OICR-41103 is a new chemical probe that targets the DCAF1 protein, offering potential for cancer and HIV treatments.

## Contribution

Development of OICR-41103, a potent and selective small molecule probe for the DCAF1 WDR domain.

## Key findings

- OICR-41103 binds to the DCAF1 WDR domain and displaces the HIV Vpr protein in biochemical and cellular assays.
- The co-crystal structure of DCAF1 with OICR-41103 reveals its binding mode, aiding in PROTAC design.
- OICR-41103 is a promising tool for targeted protein degradation and antiviral therapy.

## Abstract

Human DCAF1 is a multidomain protein that plays a critical role in protein homeostasis. Its WDR domain functions as a substrate recruitment module for RING-type CRL4 and HECT family EDVP E3 ubiquitin ligases, enabling the ubiquitination and proteasomal degradation of specific substrates. DCAF1’s activity has been implicated in cell proliferation and is documented to promote tumorigenesis. Additionally, the DCAF1 WDR domain is hijacked by lentiviral accessory proteins to induce the degradation of host antiviral factors, such as SAMHD1 and UNG2. These diverse roles make DCAF1 an attractive target for therapeutic development in oncology and antiviral strategies. It is also a promising candidate for use in targeted protein degradation. We previously reported a novel ligand, OICR-8268, that targets the DCAF1 WDR domain. In this study, we present the development of OICR-41103, a potent, selective, and cell-active small molecule chemical probe for DCAF1, derived from OICR-8268. The co-crystal structure of the DCAF1-OICR-41103 complex reveals the ligand’s binding mode within the WDR central pocket, demonstrating its potential for PROTAC design and development. Notably, OICR-41103 effectively displaces the lentiviral Vpr protein from DCAF1 in both biochemical and cellular settings, highlighting its potential for the development of HIV therapeutics.

OICR-41103 is a potent, selective probe targeting the DCAF1 WDR domain and displacing viral Vpr protein. It enables new opportunities in cancer research, antiviral therapy, and targeted protein degradation via PROTACs.

## Linked entities

- **Genes:** DCAF1 (DDB1 and CUL4 associated factor 1) [NCBI Gene 9730], SAMHD1 (SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1) [NCBI Gene 25939], UNG (uracil DNA glycosylase) [NCBI Gene 7374], vpr (Vpr) [NCBI Gene 155807]
- **Proteins:** DCAF1 (DDB1 and CUL4 associated factor 1), vpr (Vpr), SAMHD1 (SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1), UNG (uracil DNA glycosylase)
- **Chemicals:** OICR-41103 (PubChem CID 172636009), OICR-8268 (PubChem CID 166625099)
- **Diseases:** cancer (MONDO:0004992)

## Full-text entities

- **Genes:** SAMHD1 (SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1) [NCBI Gene 25939] {aka CHBL2, DCIP, HDDC1, MOP-5, SBBI88, hSAMHD1}, DCAF1 (DDB1 and CUL4 associated factor 1) [NCBI Gene 9730] {aka RIP, VPRBP}, IL17RB (interleukin 17 receptor B) [NCBI Gene 55540] {aka CRL4, EVI27, IL17BR, IL17RH1}, UNG (uracil DNA glycosylase) [NCBI Gene 7374] {aka DGU, HIGM4, HIGM5, UDG, UNG1, UNG15}
- **Diseases:** tumorigenesis (MESH:D063646)
- **Chemicals:** OICR-41103 (-)
- **Species:** Homo sapiens (human, species) [taxon 9606], Human immunodeficiency virus 1 (no rank) [taxon 11676]

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12276300/full.md

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Source: https://tomesphere.com/paper/PMC12276300