# Clinic Examination and Gene Diagnosis for a Birt–Hogg–Dubé Syndrome Family With a Novel flcn Frameshift Mutation Causing Nonsense-Mediated mRNA Degradation

**Authors:** Yang Xu, Jie Gao, Yang An, Chenxi Zou, Guoqing Ding, Guohua Yang

PMC · DOI: 10.1155/humu/7194418 · Human Mutation · 2025-02-03

## TL;DR

This study identifies a new FLCN gene mutation causing Birt–Hogg–Dubé syndrome and shows how it leads to disease through specific signaling pathways.

## Contribution

A novel FLCN frameshift mutation is identified and linked to BHD via NMD and specific signaling pathway activation.

## Key findings

- The FLCN frameshift mutation c.21_22del reduces mRNA and protein expression through NMD.
- The mutation causes BHD by activating AMPK, Wnt/β-catenin, and mTOR signaling pathways.
- The mutation leads to haploinsufficiency, contributing to BHD symptoms.

## Abstract

Background: Birt–Hogg–Dubé syndrome (BHD) was an autosomal dominant disorder caused by a mutation in the folliculin (FLCN) gene and characterized by benign cutaneous fibrofolliculomas in the head and neck, pulmonary cysts, spontaneous pneumothorax, and combined renal tumors.

Methods: This study reported a familial case presenting multiple pulmonary bullae, recurrent spontaneous pneumothorax, diffuse cystic lesions in both lungs, and renal cysts. To further clarify the diagnosis, next-generation sequencing (NGS) was performed in conjunction with the clinical diagnostic criteria for Birt–Hogg–Dubé. The eukaryotic recombinant expression vectors of pEGFP-C1-FLCN and knock-in FLCN mutation by CRISPR/Cas9 were conducted in 293 T and BEAS-2B cell lines. The mRNA and protein expression of the FLCN mutation were verified by fluorescence quantitative PCR and Western blot assay. Nonsense-mediated mRNA decay (NMD) assays and immunohistochemical assays were conducted to elucidate the pathogenicity of the mutation and explore potential mechanisms.

Results: A unique, novel, unspecified significance FLCN mutation NM_144997.7: c.21_22del (p. Cys8 Profs⁣∗28) in Exon 4 was detected in both patients. The results demonstrated that the newly identified FLCN frameshift mutation significantly decreased FLCN mRNA and protein expression. The NMD complex recognized and degraded mRNAs containing a premature termination codon (PTC) in the open reading frame of the FLCN frameshift mutation, resulting in haploinsufficiency and ultimately contributing to the manifestation of BHD. Protein expression on the AMP-activated protein kinase (AMPK), Wnt/β-catenin, and mammalian target of rapamycin (mTOR) signaling pathways by immunohistochemistry indicated that FLCN frameshift mutations were responsible for BHD through the activation of AMPK, Wnt/β-catenin, and mTOR signaling pathways.

Conclusion: The study demonstrated that a novel FLCN frameshift mutation was responsible for the pathogenesis of BHD and preliminarily demonstrated that FLCN causes BHD through the AMPK, Wnt/β-catenin, and mTOR signaling pathways.

## Linked entities

- **Genes:** FLCN (folliculin) [NCBI Gene 201163]
- **Proteins:** PRKAA1 (protein kinase AMP-activated catalytic subunit alpha 1), ctnnb1.S (catenin beta 1 S homeolog), MTOR (mechanistic target of rapamycin kinase)
- **Diseases:** Birt–Hogg–Dubé syndrome (MONDO:0007607), spontaneous pneumothorax (MONDO:0008259), renal tumors (MONDO:0021163)

## Full-text entities

- **Genes:** PRKAB1 (protein kinase AMP-activated non-catalytic subunit beta 1) [NCBI Gene 5564] {aka AMPK, HAMPKb}, MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}, CTNNB1 (catenin beta 1) [NCBI Gene 1499] {aka CTNNB, EVR7, MRD19, NEDSDV, armadillo}, FLCN (folliculin) [NCBI Gene 201163] {aka BHD, DENND8B, FLCL}
- **Diseases:** pulmonary bullae (MESH:D001768), pulmonary cysts (MESH:D003560), renal tumors (MESH:D007680), autosomal dominant disorder (MESH:D030342), pneumothorax (MESH:D011030), BHD (MESH:D058249)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** c.21_22del, p. Cys8 Profs*28
- **Cell lines:** BEAS-2B — Homo sapiens (Human), Transformed cell line (CVCL_0168), 293 T — Homo sapiens (Human), Transformed cell line (CVCL_0063)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12267975/full.md

## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12267975/full.md

## References

29 references — full list in the complete paper: https://tomesphere.com/paper/PMC12267975/full.md

---
Source: https://tomesphere.com/paper/PMC12267975