# New insights from the application of ZooMS to Late Pleistocene fauna from Grotta di Castelcivita, southern Italy

**Authors:** Annette Oertle, Jacopo Crezzini, Adriana Moroni, Annamaria Ronchitelli, Stefano Benazzi, Armando Falcucci, Giulia Marciani, Matteo Rossini, Ivan Martini, Simona Arrighi, Tom Higham, Francesco Boschin, Katerina Douka

PMC · DOI: 10.1038/s41598-025-11355-6 · Scientific Reports · 2025-07-17

## TL;DR

This study uses ZooMS to identify fragmented bones from a Paleolithic cave in Italy, revealing new insights into the faunal assemblage and subsistence patterns.

## Contribution

The study demonstrates the effectiveness of ZooMS in identifying Pleistocene faunal remains in southern Italy, revealing previously unknown species and abundance patterns.

## Key findings

- ZooMS identified a significant increase in equids and bovids during the Uluzzian and Protoaurignacian periods.
- New identifications of rhinoceros, bear, and canids were found in deeper layers of the cave.
- High collagen preservation in the bones suggests potential for further biomolecular studies in the region.

## Abstract

The Middle to Upper Paleolithic cave site of Grotta di Castelcivita (Campania, Southern Italy) contains a key archaeological sequence exhibiting Late Mousterian occupation followed by the Uluzzian techno-complex and an Aurignacian sequence (Protoaurignacian and Early Aurignacian). Abundant faunal remains are found throughout the sequence with variations in taxa present in each period. Previous studies of the morphologically identifiable faunal remains have provided valuable information on species abundance and diversity to reconstruct subsistence behaviour. However, like in many Pleistocene sequences, much of the faunal assemblage is fragmented and unidentifiable. Here we focus on these unidentified fragmentary bones to add greater dimension to the observed patterns. The application of collagen peptide mass fingerprinting (or Zooarchaeology by Mass Spectrometry; ZooMS) on 1263 unidentified bones revealed distinct changes in ZooMS NISP values in the Uluzzian and Protoaurignacian periods where equids and bovids nearly doubled in quantity compared to the original morphologically identified macrofaunal assemblage. New ZooMS identifications of rhinoceros, bear, and canids were made in layers deeper than previous recorded zooarchaeological analyses, extending the presence of these taxa at the site. The unexpectedly high level of collagen preservation in the bones from the cave confirms the potential for further applications of biomolecular approaches to Pleistocene bones from southern Italy.

The online version contains supplementary material available at 10.1038/s41598-025-11355-6.

## Linked entities

- **Species:** Rhinoceros (taxon 9808)

## Full-text entities

- **Genes:** COL1A2 (collagen type I alpha 2 chain) [NCBI Gene 1278] {aka EDSARTH2, EDSCV, OI4}
- **Diseases:** bone fractures (MESH:D050723), ZooMS (MESH:C536030)
- **Chemicals:** ars (MESH:D001128), ethanol (MESH:D000431), tungsten carbide (MESH:C002802), limestone (MESH:D002119), Acetonitrile (MESH:C032159), AmBic (MESH:C027043), oxygen (MESH:D010100), C (MESH:D002244), Rhinocerotin indet (-), HCl (MESH:D006851), charcoal (MESH:D002606), N (MESH:D009584), water (MESH:D014867), PA (MESH:D011478)
- **Species:** Megaloceros giganteus (Irish elk, species) [taxon 227166], Ursus sp. (bear, species) [taxon 9641], Pseudoplusia includens SNPV IE (no rank) [taxon 1592335], Muscardinus avellanarius (hazel dormouse, species) [taxon 39082], Ursus arctos (brown bear, species) [taxon 9644], Vulpes lagopus (Arctic fox, species) [taxon 494514], Lynx (genus) [taxon 13124], Capreolus capreolus (Western roe deer, species) [taxon 9858], Rupicapra rupicapra (chamois, species) [taxon 34869], Cuon (genus) [taxon 68729], Equus [taxon 35510], Equus sp. (species) [taxon 46122], Homo sapiens neanderthalensis (Neandertal, subspecies) [taxon 63221], Homo sapiens (human, species) [taxon 9606], Cervus elaphus (red deer, species) [taxon 9860], Canis lupus familiaris (dog, subspecies) [taxon 9615], Coelodonta antiquitatis (woolly rhinoceros, species) [taxon 222863], Equus ferus (Russian wild horse, species) [taxon 1114792], Dama dama (fallow deer, species) [taxon 30532], Abies grandis (grand fir, species) [taxon 46611], Canidae (dog, coyote, wolf, fox, family) [taxon 9608], Cuon alpinus (dhole, species) [taxon 68730], Canis lupus (gray wolf, species) [taxon 9612], Ursus spelaeus (cave bear, species) [taxon 39097], Ursus (genus) [taxon 9639], Felis (genus) [taxon 9682], Canis (genus) [taxon 9611], Microtus arvalis (common vole, species) [taxon 47230], Rangifer tarandus (caribou, species) [taxon 9870], Sus sp. (species) [taxon 9826], Rhinoceros (genus) [taxon 9808], Capra sp. (species) [taxon 61294], Equus caballus (domestic horse, species) [taxon 9796]

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12267457/full.md

## References

14 references — full list in the complete paper: https://tomesphere.com/paper/PMC12267457/full.md

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Source: https://tomesphere.com/paper/PMC12267457