# Untargeted Metabolomics to Harness Ideal Protein Concept and Mitigate Environmental Impact in Rabbit Models

**Authors:** Pablo Jesús Marín-García, Jorge Mateo-López, César Cortés-García, Lola Llobat, Alejandro Huertas-Herrera, Mónica Toro-Manríquez, María Cambra-López, Juan José Pascual, Mette Skou Hedemann

PMC · DOI: 10.3390/ijms26136047 · International Journal of Molecular Sciences · 2025-06-24

## TL;DR

This study uses metabolomics in rabbits to refine the ideal protein concept, aiming to improve nutrient efficiency and reduce environmental waste.

## Contribution

The study identifies specific metabolites that could help optimize amino acid utilization and reduce environmental impact in animal production.

## Key findings

- Both sampling time and diet significantly influenced the metabolome in rabbits.
- Diet-induced metabolome differences were less pronounced at 08:00 due to caecotrophy effects.
- Pseudourine, citric acid, pantothenic acid, and enterolactone sulfate are promising metabolites for refining the ideal protein concept.

## Abstract

Environmental pollution remains a significant challenge in animal production. The “ideal protein” concept refers to an amino acid profile that precisely meets the animal’s nutritional requirements, optimizing nutrient utilization and minimizing waste excretion. This study applied untargeted metabolomics to explore metabolic changes induced by limiting AA. Two experimental diets were used in 47-day-old growing rabbits: Met+ (with a methionine level balanced to its optimal utilization) and Met− (with a methionine level that was clearly limiting). A total of 68 blood samples were taken for untargeted metabolomics analysis and 88 were taken for targeted plasmatic urea nitrogen analysis, collected at 08:00 (in ad libitum feeding animals) and 21:00 (after a feeding event in 10 h fasting animals). Our results revealed that both sampling time and diet (at each time point) exerted a significant modulatory influence on the metabolome. Interestingly, the difference between the metabolomes obtained with the different diets was less pronounced at 08:00, likely due to the caecotrophy effect, compared to 21:00, when higher intake and lower caecotrophy frequency were observed. This study identifies pseudourine, citric acid, pantothenic acid, and enterolactone sulfate as promising metabolites that could be targeted in order to refine the ideal protein concept, thus improving nutrient efficiency and reducing the environmental impact of animal production.

## Linked entities

- **Chemicals:** citric acid (PubChem CID 311), pantothenic acid (PubChem CID 988)
- **Species:** Oryctolagus cuniculus (taxon 9986)

## Full-text entities

- **Chemicals:** AA (MESH:D000596), urea nitrogen (MESH:C530477), citric acid (MESH:D019343), pantothenic acid (MESH:D010205), enterolactone sulfate (-), Met (MESH:D008715)
- **Species:** Oryctolagus cuniculus (domestic rabbit, species) [taxon 9986]

## Full text

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## Figures

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## References

60 references — full list in the complete paper: https://tomesphere.com/paper/PMC12249901/full.md

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Source: https://tomesphere.com/paper/PMC12249901