Plasmid and chromosomal sequences of Pantoea agglomerans isolated from air in Fort Collins, Colorado
Ashley Freedman, Kendall Malmstrom, Paige Gruber, Bradley R. Borlee, Carolina Mehaffy
TL;DR
This paper reports the genome sequence of a Pantoea agglomerans strain isolated from air in Fort Collins, Colorado, including its plasmid and chromosomal sequences.
Contribution
The study provides a detailed genomic characterization of an environmental Pantoea agglomerans isolate using Nanopore sequencing.
Findings
The genome consists of two chromosomal contigs and three plasmids totaling 4.85 million base pairs.
The isolate contains 5,061 annotated genes, 12 of which are linked to drug resistance.
Abstract
A Pantoea agglomerans isolate collected from an air sample was sequenced using Nanopore technology. The genome contains five contigs, totaling 4,850,529 bp with 55.14% GC content and including two chromosomal DNA contigs and three circular plasmids. In total, the genome contains 5,061 annotated genes, including 12 associated with drug resistance.
Genes, proteins, chemicals, diseases, species, mutations and cell lines named across the full text — each resolved to its canonical identifier and authoritative record.
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Taxonomy
TopicsPlant Pathogenic Bacteria Studies · Genomics and Phylogenetic Studies · Plant-Microbe Interactions and Immunity