# ELAVL1-mediated USP29 mRNA degradation activates TAK1 driving M1 microglial polarization and neural stem cell differentiation dysregulation in spinal cord injury

**Authors:** Chunhe Sha, Feng Pan, Xiaodong Liu, Zhiqing Wang, Guohui Liu, Kai Huang

PMC · DOI: 10.1038/s41420-025-02604-8 · 2025-07-09

## TL;DR

This study shows how ELAVL1 promotes spinal cord injury by degrading USP29 mRNA, leading to TAK1 activation and harmful microglial polarization.

## Contribution

The study identifies a novel ELAVL1-USP29-TAK1 regulatory axis that drives M1 microglial polarization and NSC differentiation dysregulation in SCI.

## Key findings

- ELAVL1 binds and degrades USP29 mRNA, suppressing its expression and activating TAK1.
- ELAVL1 knockdown promotes M2 microglial polarization and improves motor function in SCI rats.
- USP29 interacts with TAK1 to inhibit its ubiquitination and phosphorylation.

## Abstract

Spinal cord injury (SCI) represents a profound neurological condition characterized by motor dysfunction and sensory impairment. Microglial polarization significantly influences neurorepair and regeneration post SCI. This study aims to investigate the regulatory role of the ELAV-like RNA binding protein 1 (ELAVL1)-ubiquitin-specific peptidase 29 (USP29)-transforming growth factor beta-activated kinase 1 (TAK1) axis in microglial polarization and its effects on differentiation of neural stem cells (NSCs). A rat model of SCI was established via spinal cord transection at the tenth thoracic vertebra segment, followed by short hairpin RNA (shRNA) lentivirus infection. Motor function and coordination were evaluated while histopathological analysis of spinal cord tissues was conducted. Microglial polarization and NSC differentiation were assessed via immunofluorescence and Western blot analysis. In cellular experiments, lipopolysaccharide (LPS) was utilized to induce M1 polarization in HMC3 cells, with polarization status determined by flow cytometry, immunofluorescence, and WB. Co-immunoprecipitation, GST pull-down, and ubiquitination assays elucidated USP29 effects on TAK1 ubiquitination and activation. In SCI rat spinal cord tissues and LPS-treated HMC3 cells, we observed upregulation of ELAVL1 and phosphorylated level of TAK1, while USP29 expression was downregulated. ELAVL1 was found to bind USP29 mRNA, promoting its degradation and suppressing USP29 expression. USP29 directly interacted with TAK1, inhibiting its ubiquitination and phosphorylation. Knockdown of ELAVL1 significantly enhanced USP29 mRNA stability, inhibited TAK1 activation, promoted M2 microglial polarization, and suppressed M1 polarization. In vivo downregulation of ELAVL1 promoted the differentiation of NSCs into neurons by inhibiting M1 polarization and promoting M2 polarization, thereby improving motor function, alleviating nerve injury, and facilitating spinal cord repair. ELAVL1 exacerbates SCI pathology by degrading USP29 mRNA, thereby activating TAK1 and driving M1 microglial polarization. Targeting the ELAVL1-USP29-TAK1 axis may offer therapeutic potential for enhancing neurorepair in SCI.

Schematic diagram of the ELAVL1-USP29-TAK1 axis mediating M1 microglial polarization and NSC differentiation dysregulation exacerbating SCI.

Schematic diagram of the ELAVL1-USP29-TAK1 axis mediating M1 microglial polarization and NSC differentiation dysregulation exacerbating SCI.

## Linked entities

- **Genes:** ELAVL1 (ELAV like RNA binding protein 1) [NCBI Gene 1994], USP29 (ubiquitin specific peptidase 29) [NCBI Gene 57663], MAP3K7 (mitogen-activated protein kinase kinase kinase 7) [NCBI Gene 6885]
- **Proteins:** ELAVL1 (ELAV like RNA binding protein 1), USP29 (ubiquitin specific peptidase 29), MAP3K7 (mitogen-activated protein kinase kinase kinase 7)
- **Diseases:** spinal cord injury (MONDO:0043797)
- **Species:** Rattus norvegicus (taxon 10116), Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** MAP3K7 (mitogen-activated protein kinase kinase kinase 7) [NCBI Gene 6885] {aka CSCF, FMD2, MEKK7, TAK1, TGF1a}, ELAVL1 (ELAV like RNA binding protein 1) [NCBI Gene 1994] {aka ELAV1, HUR, Hua, MelG}, USP29 (ubiquitin specific peptidase 29) [NCBI Gene 57663] {aka HOM-TES-84/86}
- **Diseases:** motor dysfunction (MESH:D000068079), neurological condition (MESH:D019636), nerve injury (MESH:D000080902), sensory impairment (MESH:D012678), SCI (MESH:D013119)
- **Chemicals:** LPS (MESH:D008070)
- **Species:** Rattus norvegicus (brown rat, species) [taxon 10116]
- **Cell lines:** HMC3 — Homo sapiens (Human), Transformed cell line (CVCL_II76)

## Figures

10 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12241534/full.md

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Source: https://tomesphere.com/paper/PMC12241534