# Multi-omics reveals EGCG’s anti-calcification effects associated with gut microbiota and metabolite remodeling

**Authors:** Yating Zhang, Zihan Tang, Junwen Zhu, Ruochi Zhao, Shuangshuang Wang

PMC · DOI: 10.3389/fimmu.2025.1595527 · 2025-06-26

## TL;DR

This study shows that EGCG, a natural compound, reduces vascular calcification by improving gut microbiota and metabolite balance in rats.

## Contribution

EGCG is shown to modulate both gut microbiota and metabolites to combat vascular calcification, revealing a novel therapeutic strategy.

## Key findings

- EGCG reduced calcification severity and ALP activity in vitamin D3-induced rats.
- EGCG restored gut microbiota diversity and altered key bacterial taxa and metabolite profiles.
- EGCG enhanced ubiquinone and terpenoid-quinone pathways, counteracting harmful metabolites.

## Abstract

Vascular calcification, a pathological process driven by heterotopic calcium-phosphate deposition, arises from vascular smooth muscle cells (VSMCs) osteochondrogenic transformation, epigenetic dysregulation, and metabolic reprogramming. Epigallocatechin-3-gallate (EGCG), a natural polyphenol, is associated with attenuated vascular calcification and remodeling of the gut microbiota-metabolite axis.

Twenty-four 8-week-old Sprague-Dawley rats were randomized into four groups: control (CON), vitamin D3-induced calcification (VD), VD plus EGCG (VD+EGCG), and EGCG-only (EGCG). Vascular calcification was induced via vitamin D3 injection, followed by 11-week EGCG treatment. Calcification severity was quantified using alizarin red S staining, alkaline phosphatase (ALP) immunohistochemistry/immunofluorescence, and serum metabolomics, while colon microbiota and metabolites were profiled via 16S rRNA sequencing and LC-MS/MS.

EGCG significantly reduced calcification (*P<0.05 vs. VD), as evidenced by diminished alizarin red S staining and suppressed ALP activity. Gut microbiota analysis revealed EGCG-mediated restoration of alpha diversity and taxonomic shifts, including reversal of Spirochaetota, Desulfobacterota, and Actinobacteriota abundances at the phylum level (*P<0.05); marked changes in Clostridia_UCG_014, Desulfovibrionales, Christensenellales, Erysipelotrichales, Oscillospirales, and Spirochaetales at the order level (*P<0.05); and normalization of Treponema, unclassified Treponema, and Lactobacillus johnsonii at the genus/species level (*P<0.05). Serum metabolomics identified VD3-induced upregulation of phospholipid metabolites (phosphatidylserine [PS], phosphatidylcholine [PC], lysophosphatidylcholine [LysoPC]), which were counteracted by EGCG (*P<0.05). Concurrently, EGCG enhanced ubiquinone biosynthesis and terpenoid-quinone pathways.

These changes are mechanistically linked to suppressed VSMCs osteogenic differentiation and aortic degeneration. The findings establish EGCG as a dual microbiota-metabolite modulator with therapeutic potential for vascular calcification, offering a novel strategy to target gut-vascular crosstalk in cardiovascular disease.

## Linked entities

- **Chemicals:** EGCG (PubChem CID 65064), vitamin D3 (PubChem CID 5280795), phosphatidylserine (PubChem CID 9547096), lysophosphatidylcholine (PubChem CID 5311264)

## Full-text entities

- **Diseases:** Vascular calcification (MESH:D061205), Calcification (MESH:D002114), cardiovascular disease (MESH:D002318), aortic degeneration (MESH:D009410)
- **Chemicals:** PC (MESH:C053518), phospholipid (MESH:D010743), LysoPC (MESH:C006065), phosphate (MESH:D010710), phosphatidylserine (MESH:D010718), vitamin D3 (MESH:D002762), phosphatidylcholine (MESH:D010713), PS (MESH:D010758), polyphenol (MESH:D059808), calcium (MESH:D002118), lysophosphatidylcholine (MESH:D008244), Epigallocatechin-3-gallate (MESH:C045651), alizarin red S (MESH:C004468), VD3 (-), ubiquinone (MESH:D014451)
- **Species:** Rattus norvegicus (brown rat, species) [taxon 10116], Erysipelotrichales (order) [taxon 526525], Lactobacillus johnsonii (species) [taxon 33959], Spirochaetota (phylum) [taxon 203691], Clostridia (class) [taxon 186801], Desulfovibrionales (order) [taxon 213115], Actinomycetota (actinobacteria, phylum) [taxon 201174]

## Figures

10 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12240777/full.md

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Source: https://tomesphere.com/paper/PMC12240777