# Production of recombinant D-allulose 3-epimerase utilizing an auto-induction approach in fermentor cultures suitable for industrial application

**Authors:** Kenny Lischer, Fina Amreta Laksmi, Yudhi Nugraha, Fauziah Az-Zahra, David Herawan, Ario Betha Juanssilfero, Des Saputro Wibowo, Kharisma Panji Ramadhan, Isa Nuryana, Mohd Shukuri Mohamad Ali, Bashir Sajo Mienda, Bashir Sajo Mienda, Bashir Sajo Mienda

PMC · DOI: 10.1371/journal.pone.0327420 · 2025-07-09

## TL;DR

This paper presents a scalable and cost-effective method to produce D-allulose 3-epimerase, an enzyme used to convert fructose into the rare sugar D-allulose, using auto-induction in E. coli cultures.

## Contribution

The study introduces an auto-induction approach using lactose in defined media for scalable and economical DAEase production in E. coli.

## Key findings

- Optimal concentrations of lactose, glucose, and glycerol were determined for maximum DAEase expression.
- Fermentor-scale optimization achieved 43 mg of pure DAEase per liter of culture.
- The auto-induction strategy showed potential for industrial-scale DAEase production.

## Abstract

D-Allulose 3-epimerase (DAEase) is the key enzyme catalyzing D-fructose to catalyze into D-allulose, a rare sugar in foods, which has lately drawn increasing worldwide attention owing to its possible health advantages and application as a substitute sucrose. This work focused on the development of an economical, scalable production method of DAEase by using the Escherichia coli BL21 star™ (DE3) as host expression. The research work aims to optimize the production of the enzyme through an auto-induction strategy in chemically defined media by using lactose as a natural inducer, thereby overcoming various limitations of conventional IPTG induction methods. The optimal concentration of lactose, glucose, and glycerol for maximum expression of DAEase was determined to be 1.5%, 0.125%, and 1.5%, respectively. Fermentor-scale optimization yielded a maximum amount of this enzyme with 5% inoculant, 300 rpm agitation, and 2 vvm aeration. Purification by affinity and anion exchange chromatography resulted in a sevenfold increase in specific activity with an overall yield of 12% and 43 mg of pure recombinant DAEase per liter of culture. Enzyme assays confirmed that DAEase had catalytic activity in the conversion of D-fructose to D-allulose, which was further confirmed by HPLC analysis. This optimized auto-induction-based strategy demonstrated its potential for large-scale production of DAEase in a cost-effective manner with enhanced reproducibility to meet industrial demands for synthesizing D-allulose.

## Linked entities

- **Chemicals:** D-fructose (PubChem CID 716), D-allulose (PubChem CID 441036), lactose (PubChem CID 6134), glucose (PubChem CID 5793), glycerol (PubChem CID 753)
- **Species:** Escherichia coli (taxon 562)

## Full-text entities

- **Chemicals:** D-allulose (MESH:C003243), IPTG (MESH:D007544), lactose (MESH:D007785), glycerol (MESH:D005990), D-fructose (MESH:D005632), sucrose (MESH:D013395), glucose (MESH:D005947)

## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12240355/full.md

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Source: https://tomesphere.com/paper/PMC12240355