# SARS-CoV-2 vaccination unmasks distinct immune dysfunctions across lymphoma subtypes and therapies

**Authors:** Yogambigai Velmurugu, Anna Halling Folkmar Rahimic, Ryan Curtin, Yuan Hao, Samantha Nyovanie, James Langton, Pamela Mishra, Iryna Voloshyna, Akiko Koide, Shohei Koide, Gregg J. Silverman, Ramin Sedaghat Herati, Yury Patskovsky, Catherine Diefenbach, Michelle Krogsgaard

PMC · DOI: 10.21203/rs.3.rs-7016519/v1 · Research Square · 2025-07-04

## TL;DR

This study shows how lymphoma treatments affect immune responses to SARS-CoV-2 vaccines, revealing differences in immune function across therapies and subtypes.

## Contribution

The study identifies distinct immune dysfunctions in vaccinated lymphoma patients based on treatment type and subtype, beyond B cell depletion.

## Key findings

- aCD20±CT-treated patients showed elevated EM3 CD4+ and EMRA CD8+ T cells, reduced cTfh cells, and increased DN3 B cells.
- CT-only Hodgkin lymphoma patients maintained antibody responses similar to healthy controls, unlike aCD20±CT-treated patients.
- SARS-CoV-2-specific T cells in aCD20±CT-treated patients showed increased Th1 populations and EMRA CD8+ T cells, indicating compensatory immunity.

## Abstract

Patients with lymphoma are at increased risk of severe infections, including SARS-CoV-2, due to immune suppression. Using multidimensional spectral flow cytometry and serology, we characterized in-depth immune responses in 50 SARS-CoV-2 vaccinated lymphoma patients across12 lymphoma subtypes, treated with anti-CD20 antibody (aCD20) ± chemotherapy (CT) or CT alone. Compared to healthy control, aCD20±CT-treated patients exhibited distinct immune alterations, including elevated late-stage effector memory (EM3) CD4+, and terminally differentiated (EMRA) CD8+ T cells, reduced circulating T follicular helper (cTfh) cells, and increased dysfunctional DN3 B cells. While B cell depletion was expected with aCD20 therapy, our data reveals broader immune dysregulation beyond B cell loss. Consistent with these phenotypic changes, aCD20±CT treated patients showed impaired vaccine-induced antibody and T-cell responses. In contrast, CT-only Hodgkin lymphoma patients maintained antibody responses comparable to healthy controls. Notably, SARS-CoV-2-specific T cells in aCD20±CT treated patients displayed fewer regulatory T cells, increased Th1 population, and more EMRA CD8+ T cells, suggesting a compensatory T-cell mediated immunity. Antibody response correlated positively with naïve T cell frequencies and transitional, classical memory, and DN2 B cell subsets. These findings inform the tailored development of vaccine strategies for immunocompromised patients to enhance protection against emerging SARS-CoV-2 variants and other viral pathogens.

## Linked entities

- **Proteins:** CD4 (CD4 molecule), CD8A (CD8 subunit alpha)
- **Diseases:** lymphoma (MONDO:0003659), SARS-CoV-2 (MONDO:0100096), Hodgkin lymphoma (MONDO:0004952)

## Full-text entities

- **Genes:** CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, KRT20 (keratin 20) [NCBI Gene 54474] {aka CD20, CK-20, CK20, K20, KRT21}
- **Diseases:** lymphoma (MESH:D008223), Hodgkin lymphoma (MESH:D006689), infections (MESH:D007239), immune dysfunctions (MESH:D007154)
- **Chemicals:** aCD20 (MESH:C119496)
- **Species:** Severe acute respiratory syndrome coronavirus 2 (no rank) [taxon 2697049], Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12236899/full.md

## References

124 references — full list in the complete paper: https://tomesphere.com/paper/PMC12236899/full.md

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Source: https://tomesphere.com/paper/PMC12236899