# Circadian influences on central nervous system barriers and the glymphatic system

**Authors:** Brittany D. Elliott, Claire O. Kisamore, Randy J. Nelson, A. Courtney DeVries, William H. Walker

PMC · DOI: 10.3389/fphys.2025.1622236 · 2025-06-23

## TL;DR

This review explores how circadian rhythms influence key systems that maintain brain health and fluid balance.

## Contribution

It synthesizes recent evidence on the role of circadian rhythms in regulating CNS barriers and fluid systems.

## Key findings

- Circadian rhythms regulate the blood-brain barrier and blood-cerebrospinal fluid barrier.
- The glymphatic system's function is influenced by circadian timing.
- Disruption of circadian rhythms may contribute to neurological disorders.

## Abstract

The central nervous system (CNS), comprising the brain and spinal cord, is fortified by complex barriers that protect the underlying organs and maintain homeostasis. The importance of proper fortification and homeostatic regulation provided by these systems has broad implications for many physiological processes and several pathological conditions are associated with their disruption. Recent studies support the notion that CNS barriers and fluids are regulated by circadian rhythms. Whereas reciprocal associations between the structural and functional integrity of neural barriers and disease states are well-established, the role of circadian rhythms in mediating these relationships remains unspecified. The goals of this review are to provide a general overview of three primary systems responsible for maintaining CNS homeostasis, namely the blood-brain barrier, blood-cerebrospinal fluid barrier, and glymphatic system, and to synthesize recent evidence highlighting the role of circadian rhythms as a critical regulator of CNS fluid and barrier function.

Diagram illustrating the circadian clock's influence on three systems: 1) blood-brain barrier, shown with cellular structures; 2) blood-cerebrospinal fluid barrier, featuring the choroid plexus in a brain diagram; 3) glymphatic system, depicted with interconnected neural pathways.

## Full-text entities

- **Genes:** Nr1d2 (nuclear receptor subfamily 1, group D, member 2) [NCBI Gene 353187] {aka RVR, Rev-erb}, CPE (carboxypeptidase E) [NCBI Gene 1363] {aka BDVS, CPH, IDDHH}, Cpe (carboxypeptidase E) [NCBI Gene 12876] {aka CPH, Cph-1, Cph1, NF-alpha1, fat}, Grp (gastrin releasing peptide) [NCBI Gene 225642] {aka BLP}, Npy (neuropeptide Y) [NCBI Gene 109648] {aka 0710005A05Rik}, Atp6v0a2 (ATPase, H+ transporting, lysosomal V0 subunit A2) [NCBI Gene 21871] {aka 8430408C20Rik, ATP6a2, Atp6n1d, Atp6n2, ISF, J6B7}, Slc4a10 (solute carrier family 4, sodium bicarbonate cotransporter-like, member 10) [NCBI Gene 94229] {aka NCBE, mKIAA4136}, Cry1 (cryptochrome circadian regulator 1) [NCBI Gene 12952] {aka Phll1}, Cry2 (cryptochrome circadian regulator 2) [NCBI Gene 12953] {aka D130054K12Rik}, Slc12a2 (solute carrier family 12, member 2) [NCBI Gene 20496] {aka 9330166H04Rik, BSC2, Nkcc1, mBSC2, mNKCC1, sy-ns}, Afdn (afadin, adherens junction formation factor) [NCBI Gene 17356] {aka 5033403D15Rik, AF6, Af-6, Afadin, Gm314, I-afadin}, Slc16a6 (solute carrier family 16 (monocarboxylic acid transporters), member 6) [NCBI Gene 104681] {aka ESTM12, MCT 6, MCT 7, MCT6}, IL-1beta [NCBI Gene 443539], Trpv4 (transient receptor potential cation channel, subfamily V, member 4) [NCBI Gene 63873] {aka 0610033B08Rik, OTRPC4, Trp12, VR-OAC, VRL-2, VROAC}, Nr1d1 (nuclear receptor subfamily 1, group D, member 1) [NCBI Gene 217166] {aka A530070C09Rik}, Pgp (phosphoglycolate phosphatase) [NCBI Gene 67078] {aka 1700012G19Rik, AUM, G3PP}, Vip (vasoactive intestinal polypeptide) [NCBI Gene 22353], Gja3 (gap junction protein, alpha 3) [NCBI Gene 14611] {aka Cnx46, Cx43, Cx46, Cxnj1, Gja-3}, Slc24a4 (solute carrier family 24 (sodium/potassium/calcium exchanger), member 4) [NCBI Gene 238384] {aka A930002M03Rik, NCKX4}, TLR2 [NCBI Gene 554262], Abcb1a (ATP-binding cassette, sub-family B member 1A) [NCBI Gene 18671] {aka Abcb4, Evi32, Mdr1a, Mdr3, P-gp, Pgp}, Bmal1 (basic helix-loop-helix ARNT like 1) [NCBI Gene 11865] {aka Arnt3, Arntl, BMAL1b, MOP3, bHLHe5, bmal1b'}, Csf2 (colony stimulating factor 2) [NCBI Gene 116630] {aka Gm-csf, Gmcsf}, Rora (RAR-related orphan receptor alpha) [NCBI Gene 19883] {aka 9530021D13Rik, Nr1f1, ROR1, ROR2, ROR3, nmf267}, Slc9a1 (solute carrier family 9 (sodium/hydrogen exchanger), member 1) [NCBI Gene 20544] {aka Apnh, Mir5122, Nhe1, mir-5122, swe}, Ctnnb1 (catenin beta 1) [NCBI Gene 12387] {aka Bfc, Catnb, Mesc}, Aqp4 (aquaporin 4) [NCBI Gene 11829] {aka WCH4}, Slc38a3 (solute carrier family 38, member 3) [NCBI Gene 76257] {aka 0610012J02Rik, D9Ucla2, Nat1, Slc38-3, Sn1, Snat3}, Adcyap1 (adenylate cyclase activating polypeptide 1) [NCBI Gene 11516] {aka PACAP}, Trpm7 (transient receptor potential cation channel, subfamily M, member 7) [NCBI Gene 58800] {aka 2310022G15Rik, 4833414K03Rik, 5033407O22Rik, CHAK, CHAK1, LTrpC-7}, Per1 (period circadian clock 1) [NCBI Gene 18626] {aka Hftm, Per, m-rigui, mPer1}, Abcd4 (ATP-binding cassette, sub-family D member 4) [NCBI Gene 19300] {aka P69r, P70R, Pxmp1l}, Slc16a2 (solute carrier family 16 (monocarboxylic acid transporters), member 2) [NCBI Gene 20502] {aka Mct8, Xpct}, Cldn5 (claudin 5) [NCBI Gene 12741] {aka MBEC1, Tmvcf}, CLDN2 (claudin 2) [NCBI Gene 9075] {aka OAZON, claudin-2}, Prl (prolactin) [NCBI Gene 19109] {aka Gha1, Prl1a1}, Per2 (period circadian clock 2) [NCBI Gene 18627] {aka mKIAA0347, mPer2}, Cldn3 (claudin 3) [NCBI Gene 12739] {aka Cpetr2, mRVP1}, Slco1a1 (solute carrier organic anion transporter family, member 1a1) [NCBI Gene 28248] {aka A530084B21, OATP-1, Oatp1, Oatp1a1, Slc21a1}, Slc4a5 (solute carrier family 4, sodium bicarbonate cotransporter, member 5) [NCBI Gene 232156] {aka C330006M16, C330016K18Rik}, Mcph1 (microcephaly, primary autosomal recessive 1) [NCBI Gene 244329] {aka 5430437K10Rik, BRIT1, D030046N04Rik, MCT, Tg(HLA-A2.1)1Enge}, Abcb1b (ATP-binding cassette, sub-family B member 1B) [NCBI Gene 18669] {aka Abcb1, Mdr1, Mdr1b, Pgy-1, Pgy1, mdr}, Abcg2 (ATP binding cassette subfamily G member 2 (Junior blood group)) [NCBI Gene 26357] {aka ABC15, ABCP, BCRP, Bcrp1, MXR, MXR1}, TLR4 [NCBI Gene 554263], Slc22a6 (solute carrier family 22 (organic anion transporter), member 6) [NCBI Gene 18399] {aka NKT, Oat1, Orctl1, mOat1}, PGP (phosphoglycolate phosphatase) [NCBI Gene 283871] {aka AUM, G3PP, PGPase}, Gja1 (gap junction protein, alpha 1) [NCBI Gene 14609] {aka Cnx43, Cx43, Cx43alpha1, Cxnk1, Gja-1, Npm1}, Slc4a2 (solute carrier family 4 (anion exchanger), member 2) [NCBI Gene 20535] {aka Ae2, B3RP}, Lep (leptin) [NCBI Gene 16846] {aka ob, obese}, ABCB6 (ATP binding cassette subfamily B member 6 (LAN blood group)) [NCBI Gene 10058] {aka ABC, LAN, MTABC3, PRP, umat}, Cdh2 (cadherin 2) [NCBI Gene 12558] {aka CDHN, N-CAD, Ncad}, Tjp1 (tight junction protein 1) [NCBI Gene 21872] {aka ZO1}, Slc4a4 (solute carrier family 4 (anion exchanger), member 4) [NCBI Gene 54403] {aka NBC, NBC1}, Slc12a7 (solute carrier family 12, member 7) [NCBI Gene 20499] {aka D13Ertd261e, Kcc4}, ABCC1 (ATP binding cassette subfamily C member 1 (ABCC1 blood group)) [NCBI Gene 4363] {aka ABC29, ABCC, DFNA77, GS-X, MRP, MRP1}, Abca3 (ATP-binding cassette, sub-family A member 3) [NCBI Gene 27410] {aka 1810036E22Rik, ABC-C, Abc3}, Hcrt (hypocretin) [NCBI Gene 15171] {aka PPOX}, Abcc4 (ATP-binding cassette, sub-family C member 4) [NCBI Gene 239273] {aka ABCC4-N1, D630049P08Rik, MOATB, MRP4}, Tjp2 (tight junction protein 2) [NCBI Gene 21873] {aka ZO-2}, Aqp4 (aquaporin 4) [NCBI Gene 25293] {aka AQP-4, Miwc, WCH4}
- **Diseases:** neurodegenerative and cerebrovascular diseases (MESH:D019636), CP (MESH:D002833), neuroinflammation (MESH:D000090862), inflammation (MESH:D007249), cancer (MESH:D009369), sleep disruption (MESH:D019958), Central Nervous System (MESH:D002493), Choroid Plexus (MESH:D020288), Arachnoid Granulation (MESH:D001100), IPAD (MESH:D000094666), affective disorders (MESH:D019964), sleep restriction (MESH:D002313), PVS (MESH:D054973), sleep disturbance (MESH:D012893), Breast Cancer (MESH:D001943), sleep deprivation (MESH:D012892), RHT (MESH:D014570), BCSFB (MESH:C536830)
- **Chemicals:** xylazine (MESH:D014991), dexamethasone (MESH:D003907), 14C (MESH:C000615234), tribromoethanol (MESH:C062527), inulin (MESH:D007444), 125I (MESH:C000614960), quinidine (MESH:D011802), BMAL (-), amino acids (MESH:D000596), sodium fluorescein (MESH:D019793), glycosaminoglycans (MESH:D006025), rhodamine B (MESH:C029773), calcium (MESH:D002118), glucose (MESH:D005947), carbohydrates (MESH:D002241), lipid (MESH:D008055), melatonin (MESH:D008550), K+ (MESH:D011188), LPS (MESH:D008070), ATP (MESH:D000255), glutamate (MESH:D018698), cAMP (MESH:D000242), methotrexate (MESH:D008727), HCO3- (MESH:D001639), histamine (MESH:D006632), pentobarbital (MESH:D010424), dextran (MESH:D003911), Na+ (MESH:D012964), Cl- (MESH:D002713), water (MESH:D014867), Rh123 (MESH:D020112)
- **Species:** Homo sapiens (human, species) [taxon 9606], Ovis aries (domestic sheep, species) [taxon 9940], Mus musculus (house mouse, species) [taxon 10090], Drosophila melanogaster (fruit fly, species) [taxon 7227], Rodentia (rodent, order) [taxon 9989], Rattus norvegicus (brown rat, species) [taxon 10116]
- **Cell lines:** bEnd.3 — Mus musculus (Mouse), Transformed cell line (CVCL_0170), C57BL/6 — Mus musculus (Mouse), Transformed cell line (CVCL_C0MU), C57BL/6J — Mus musculus (Mouse), Transformed cell line (CVCL_C0MW), BALB/c — Mus musculus (Mouse), Spontaneously immortalized cell line (CVCL_0184)

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12230010/full.md

---
Source: https://tomesphere.com/paper/PMC12230010