# KCS1 and VIP1 , the genes encoding yeast phosphoinositol pyrophosphate synthases, are required for Ca2+‐mediated response to dimethylsulfoxide (DMSO)

**Authors:** Larisa Ioana Gogianu, Lavinia Liliana Ruta, Claudia Valentina Popa, Simona Ghenea, Ileana Cornelia Farcasanu

PMC · DOI: 10.1002/2211-5463.70039 · FEBS Open Bio · 2025-04-11

## TL;DR

This study shows that yeast genes KCS1 and VIP1 are essential for the cell's calcium-based response to DMSO, a common solvent with toxic effects.

## Contribution

The study identifies KCS1 and VIP1 as critical for Ca2+ signaling in response to DMSO stress in yeast.

## Key findings

- DMSO exposure triggers a two-phase cytosolic Ca2+ wave dependent on the Cch1/Mid1 channel.
- KCS1 and VIP1 gene deletions suppress the DMSO-induced Ca2+ response.
- Phosphoinositol pyrophosphate and Ca2+ signaling are both involved in yeast adaptation to DMSO stress.

## Abstract

Dimethylsulfoxide (DMSO) is widely used as a solvent or as a carrier when screening for biologic activity of various chemicals, but results need to be interpreted carefully due to its intrinsic toxicity. DMSO has been previously observed to impair the growth of yeast cells defective in calcium movement across cellular membranes and in phosphoinositol pyrophosphate synthases. Here, we set out to investigate the Ca2+‐mediated response to DMSO in Saccharomyces cerevisiae. The cell exposure to DMSO was signaled by a two‐phase cytosolic Ca2+ wave that was dependent on Mid1, a subunit of the Cch1/Mid1 Ca2+ channel located at the plasma membrane. While the vacuolar Ca2+ channel Trpy1 also contributed by releasing Ca2+ from the vacuole, the immediate cell response to DMSO exposure depended on the external Ca2+ imported into the cell through Cch1/Mid1. A chemogenomic screen previously performed on a collection of yeast knockout mutants identified the two phosphoinositol pyrophosphate synthases Kcs1 and Vip1 as determinants for yeast tolerance to DMSO. Deletion of KCS1 or VIP1 genes suppressed the DMSO‐induced Ca2+ response, suggesting that both Ca2+ and phosphoinositol pyrophosphate signaling contribute to cell adaptation under DMSO stress.

Ca2+‐mediated response to DMSO was investigated in Saccharomyces cerevisiae cells expressing Ca2+‐dependent aequorin. Cell exposure to DMSO induced a cytosolic Ca2+ wave dependent on the integrity of the Cch1/Mid1 channel. Deletion of KCS1 or VIP1 genes encoding the phosphoinositol pyrophosphate (PP‐IP) synthases suppressed the DMSO‐induced Ca2+ response, indicating that both Ca2+ and PP‐IP signaling contribute to cell adaptation under DMSO stress.

## Linked entities

- **Genes:** TBCE (tubulin folding cofactor E) [NCBI Gene 6905], PPIP5K1 (diphosphoinositol pentakisphosphate kinase 1) [NCBI Gene 9677]
- **Proteins:** MID1 (midline 1), CCH1 (calcium channel protein CCH1)
- **Chemicals:** DMSO (PubChem CID 679)
- **Species:** Saccharomyces cerevisiae (taxon 4932)

## Full-text entities

- **Genes:** CCH1 (calcium channel protein CCH1) [NCBI Gene 853131], MID1 (Mid1p) [NCBI Gene 855425], VIP1 (inositol polyphosphate kinase VIP1) [NCBI Gene 851126], KCS1 (inositol polyphosphate kinase KCS1) [NCBI Gene 851580]
- **Diseases:** toxicity (MESH:D064420)
- **Chemicals:** calcium (MESH:D002118), DMSO (MESH:D004121), Ca2+ (-)
- **Species:** Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932]

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12226410/full.md

## References

53 references — full list in the complete paper: https://tomesphere.com/paper/PMC12226410/full.md

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Source: https://tomesphere.com/paper/PMC12226410