# Identification of two KPC variants, KPC-204 and KPC-227, in ST11-K64 Klebsiella pneumoniae during prolonged hospitalization of a single patient

**Authors:** Shijun Sun, Chaoe Zhou, Haijun Li, Liying Sun, Saiqi Qi, Xinmin Liu, Wanhai Wang

PMC · DOI: 10.3389/fmicb.2025.1543470 · Frontiers in Microbiology · 2025-06-17

## TL;DR

Two new KPC enzyme variants, KPC-204 and KPC-227, were identified in a patient with prolonged hospitalization, showing evolving resistance to antibiotics.

## Contribution

Discovery of KPC-227, a novel variant that restores carbapenem susceptibility but maintains resistance to ceftazidime-avibactam.

## Key findings

- KPC-204 confers resistance to carbapenems and ceftazidime-avibactam due to a DDK insertion.
- KPC-227, with a D179Y mutation, restores carbapenem susceptibility but remains resistant to ceftazidime-avibactam.
- A novel mgrB mutation was linked to colistin resistance in the isolates.

## Abstract

Carbapenem-resistant Klebsiella pneumoniae (CRKP) represents a critical global public health challenge due to its significant association with morbidity and mortality. Ceftazidime-avibactam (CZA) has emerged as an effective therapy against CRKP producing the serine carbapenemase KPC; however, resistance driven by novel KPC variants is increasingly reported.

In this study, 27 CRKP isolates were collected from elderly pneumonia patients in China. Sequential isolates from a single patient undergoing prolonged hospitalization revealed dynamic resistance evolution.

Whole-genome sequencing identified KPC-227, a novel KPC variant, alongside the previously reported KPC-204. KPC-204, carrying a “DDK” insertion at position 270, conferred resistance to both carbapenems and CZA, while KPC-227, harboring a D179Y mutation, restored carbapenem susceptibility but maintained CZA resistance. Molecular docking analyses revealed that the D179Y mutation impaired meropenem hydrolysis by decreasing binding affinity. Additionally, colistin resistance was observed due to a novel mgrB mutation.

These findings highlight the high evolutionary potential of KPC enzymes and the importance of vigilance to curb the emergence and dissemination of resistance, which threatens the efficacy of critical lastresort antibiotics.

## Linked entities

- **Genes:** mgrB (PhoQ kinase inhibitor) [NCBI Gene 946351]
- **Chemicals:** ceftazidime-avibactam (PubChem CID 90643431), carbapenems (PubChem CID 134085), meropenem (PubChem CID 441130), colistin (PubChem CID 5311054)
- **Diseases:** pneumonia (MONDO:0005249)
- **Species:** Klebsiella pneumoniae (taxon 573)

## Full-text entities

- **Diseases:** Klebsiella pneumoniae (MESH:D007710), KPC (MESH:C565455), pneumonia (MESH:D011014)
- **Chemicals:** meropenem (MESH:D000077731), Carbapenem (MESH:D015780), CZA (MESH:C000595613)
- **Species:** Homo sapiens (human, species) [taxon 9606], Klebsiella pneumoniae (species) [taxon 573]
- **Mutations:** D179Y, insertion at position 270

## Full text

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## Figures

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## References

39 references — full list in the complete paper: https://tomesphere.com/paper/PMC12209373/full.md

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Source: https://tomesphere.com/paper/PMC12209373