# Somatic mutations and outcomes in chronic myeloid leukemia adolescent and young adults compared to children, adults, and BCR::ABL1-positive acute lymphoblastic leukemia

**Authors:** Jitka Krizkova, Vaclava Polivkova, Adam Laznicka, Nikola Curik, Adela Benesova, Pavla Suchankova, Tomas Smazik, Veronika Vysinova, Dana Mikulenkova, Hana Klamova, Marketa Stastna Markova, Dana Srbova, Jan Zuna, Marketa Zaliova, Jan Trka, Cyril Salek, Katerina Machova Polakova

PMC · DOI: 10.1038/s41375-025-02609-3 · 2025-04-28

## TL;DR

This study compares genetic mutations and treatment outcomes in young adults with chronic myeloid leukemia to children, adults, and those with a related blood cancer.

## Contribution

The study reveals distinct mutation patterns and treatment responses in adolescent and young adult leukemia patients.

## Key findings

- AYAs with CML-CP had higher cancer-related gene mutation rates than adults or children.
- ASXL1 mutations were linked to worse survival in AYAs and adults but not to increased BCR::ABL1 mutations during treatment.
- Nilotinib improved outcomes for AYAs with ASXL1 mutations, suggesting the benefit of higher-generation TKIs.

## Abstract

Adolescent and young adults (AYAs) with chronic myeloid leukemia in chronic phase (CML-CP) reportedly respond worse to tyrosine kinase inhibitors (TKIs) than adults, potentially due to additional genetic abnormalities, including mutations in cancer-related genes (CRGs). This real-life study compared mutation profiles and their impact on outcomes in 80 AYA, 97 adult, and 16 pediatric CML-CP patients, alongside 81 BCR::ABL1-positive acute lymphoblastic leukemia (Ph+ ALL) patients. CRG mutations were more frequent in AYAs (25.0%) than in adults (19.6%) or children (12.5%). AYAs with Ph+ ALL exhibited higher mutational frequencies (53.3%) compared to children (26.7%) and adults (38.9%). At diagnosis, mutations in ASXL1, DNMT3A, and TET2 dominated in CML-CP and RUNX1, IKZF1, and BCR::ABL1 in Ph+ ALL. ASXL1 mutations correlated with reduced progression-free survival (PFS) in AYAs and adults. Unlike adults, AYAs showed no increase in BCR::ABL1 kinase domain mutations during TKI therapy. Nilotinib improved PFS in AYAs with ASXL1 mutations, highlighting the efficacy of higher-generation TKIs. ASXL1 mutations also impaired erythropoiesis, warranting further validation. Despite a higher mutational burden, AYAs did not exhibit worse prognoses than adults. Lower mutation rates at follow-up suggest potential impact of nilotinib. Mutation profiling and optimized TKI use are crucial to mitigate progression risks in CRG-mutated patients.

## Linked entities

- **Genes:** ASXL1 (ASXL transcriptional regulator 1) [NCBI Gene 171023], DNMT3A (DNA methyltransferase 3 alpha) [NCBI Gene 1788], TET2 (tet methylcytosine dioxygenase 2) [NCBI Gene 54790], RUNX1 (RUNX family transcription factor 1) [NCBI Gene 861], IKZF1 (IKAROS family zinc finger 1) [NCBI Gene 10320]
- **Chemicals:** nilotinib (PubChem CID 644241)
- **Diseases:** chronic myeloid leukemia (MONDO:0011996), acute lymphoblastic leukemia (MONDO:0004967)

## Full-text entities

- **Genes:** RUNX1 (RUNX family transcription factor 1) [NCBI Gene 861] {aka AML1, AML1-EVI-1, AMLCR1, CBF2alpha, CBFA2, EVI-1}, CHD7 (chromodomain helicase DNA binding protein 7) [NCBI Gene 55636] {aka CRG, HH5, IS3, KAL5}, DNMT3A (DNA methyltransferase 3 alpha) [NCBI Gene 1788] {aka DNMT3A2, HESJAS, M.HsaIIIA, TBRS}, IKZF1 (IKAROS family zinc finger 1) [NCBI Gene 10320] {aka CVID13, Hs.54452, IK1, IKAROS, LYF1, LyF-1}, TET2 (tet methylcytosine dioxygenase 2) [NCBI Gene 54790] {aka IMD75, KIAA1546, MDS}, ASXL1 (ASXL transcriptional regulator 1) [NCBI Gene 171023] {aka BOPS, MDS}
- **Diseases:** Ph+ ALL (MESH:D054198), chronic myeloid leukemia (MESH:D015464), CML-CP (MESH:D015466), cancer (MESH:D009369), genetic abnormalities (MESH:D030342)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12208900/full.md

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Source: https://tomesphere.com/paper/PMC12208900