# Unexpected diversity and ecological significance of uncultivable large virus-like particles in aquatic environments

**Authors:** Hermine Billard, Maxime Fuster, François Enault, Jean-François Carrias, Léa Fargette, Margot Carrouée, Perrine Desmares, Tom O Delmont, Pauline Nogaret, Estelle Bigeard, Gwenn Tanguy, Anne-Claire Baudoux, Urania Christaki, Télesphore Sime-Ngando, Jonathan Colombet

PMC · DOI: 10.1093/ismeco/ycaf098 · 2025-06-05

## TL;DR

This study reveals new types of large viruses in water and shows they play a big role in controlling tiny organisms.

## Contribution

The study uncovers new viral morphotypes and their ecological roles using flow cytometry and electron microscopy.

## Key findings

- New viral morphotypes associated with microeukaryotes were discovered in aquatic environments.
- Large virus-like particles show significant abundances and multi-year dynamics in these environments.
- These viruses are key regulators of microbial communities.

## Abstract

The discovery of jumbo phages and giant viruses of microeukaryotes has transformed our perception of the virosphere. Metagenomic and metatranscriptomic data further highlight their diversity and ecological impact. Nevertheless, sequence-based approaches fail to take into account the morphological diversity of non-cultivated viruses, resulting in our fragmented understanding of their nature and role in the environment. Here, we combined flow cytometry and electron microscopy to uncover both previously unsuspected morphological diversity and significant abundances of large virus-like particles in aquatic environments. We discovered new viral morphotypes, all likely to be associated with microeukaryotes. We also obtained insights into the multi-year dynamics of the abundances of both giant microeukaryotic virus-like particles and jumbo phage-like particles. This work deepens our understanding of large virus and reveals their key role as regulators of microbial communities.

Graphical Abstract

## Full-text entities

- **Genes:** VSNL1 (visinin like 1) [NCBI Gene 7447] {aka HLP3, HPCAL3, HUVISL1, VILIP, VILIP-1}, MFT2 (Trichoepithelioma, multiple familial, 2) [NCBI Gene 100188881] {aka TEM}, CS (citrate synthase) [NCBI Gene 1431]
- **Diseases:** infection (MESH:D007239), CS (MESH:D002836)
- **Chemicals:** CS (-), formaldehyde (MESH:D005557), argon (MESH:D001128), glutaraldehyde (MESH:D005976), SGI (MESH:C098022), carbon (MESH:D002244), glycans (MESH:D011134), salt (MESH:D012492), NaCL (MESH:D012965), copper (MESH:D003300), water (MESH:D014867)
- **Species:** Viruses (acellular root) [taxon 10239], Acanthamoeba sp. (species) [taxon 5756], Cafeteria roenbergensis virus (no rank) [taxon 1513235], PX clade (clade) [taxon 569578], Cyanobacteriota (blue-green algae, phylum) [taxon 1117], Cryptomonas sp. (species) [taxon 3031]
- **Mutations:** C-20 C

## Figures

15 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12204322/full.md

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Source: https://tomesphere.com/paper/PMC12204322