# Oxygen isotope fractionation during anaerobic ammonium oxidation by the marine representative Candidatus Scalindua sp

**Authors:** Kanae Kobayashi, Kazuya Nishina, Keitaro Fukushima, Yuji Onishi, Akiko Makabe, Mamoru Oshiki, Keisuke Koba, Satoshi Okabe

PMC · DOI: 10.1093/ismejo/wraf115 · The ISME Journal · 2025-06-02

## TL;DR

This study explores oxygen isotope effects during anammox, a process that removes nitrogen from the ocean, revealing new insights into its geochemical signatures.

## Contribution

The study introduces a new rate constant for anammox-mediated oxygen isotope exchange and determines previously unknown oxygen isotope effects.

## Key findings

- Anammox accelerates oxygen isotope exchange between NO2− and H2O significantly compared to abiotic processes.
- Oxygen isotope fractionation values for NO2− to N2 and NO3− were determined, including an inverse fractionation for NO2− to NO3−.
- Oxygen from water is incorporated during NO2− oxidation to NO3− with a distinct isotope signal.

## Abstract

Analysing the nitrogen (15ε) and oxygen (18ε) isotope effects of anaerobic ammonium oxidation (anammox) is essential for accurately assessing its potential contribution to fixed-N losses in the ocean, yet the 18ε of anammox remains unexplored. Here, we determined the previously unexplored 18ε of anammox using a highly enriched culture of the marine anammox species “Ca. Scalindua sp”. Because Scalindua significantly accelerated oxygen isotope exchange between NO2− and H2O, we introduced a new rate constant for anammox-mediated oxygen isotope exchange (keq, AMX = 8.44 ~ 13.56 × 10−2 h−1), which is substantially faster than abiotic oxygen isotope exchange (keq, abio = 1.13 × 10−2 h−1), into a numerical model to estimate the 18ε during anammox. Based on our experimental results, we successfully determined the 18ε associated with: (1) conversion of NO2− to N2 (18εNO2- → N2 = 10.6 ~ 16.1‰), (2) NO2− oxidation to NO3− (18εNO2- → NO3- = −2.9 ~ −11.0‰, inverse fractionation), (3) incorporation of oxygen from water during NO2− oxidation to NO3− (18εH2O = 16.4 ~ 19.2‰). Our study underscores the possibility that unique anammox oxygen isotope signals may be masked due to substantial anammox-mediated oxygen isotope exchange between NO2− and H2O. Therefore, careful consideration is required when utilizing δ18ONO3- and δ18ONO2- as geochemical markers to assess the potential contribution of anammox to fixed-N losses in the ocean.

Graphical Abstract

## Linked entities

- **Chemicals:** NO2− (PubChem CID 946), N2 (PubChem CID 947), NO3− (PubChem CID 943), H2O (PubChem CID 962)

## Full-text entities

- **Chemicals:** Oxygen (MESH:D010100), NO3- (MESH:C038619), NO2- (MESH:D009585), ammonium (MESH:D064751), 18epsilon (-), N2 (MESH:D009584), H2O (MESH:D014867)

## Full text

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## Figures

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## References

70 references — full list in the complete paper: https://tomesphere.com/paper/PMC12203076/full.md

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Source: https://tomesphere.com/paper/PMC12203076