# Insights into miRNAs of the Stingless Bee Melipona quadrifasciata

**Authors:** Dalliane Oliveira Soares, Lucas Yago Melo Ferreira, Gabriel Victor Pina Rodrigues, João Pedro Nunes Santos, Ícaro Santos Lopes, Lucas Barbosa de Amorim Conceição, Tatyana Chagas Moura, Isaque João da Silva de Faria, Roenick Proveti Olmo, Weyder Cristiano Santana, Marco Antônio Costa, Eric Roberto Guimarães Rocha Aguiar

PMC · DOI: 10.3390/ncrna11030048 · Non-Coding RNA · 2025-06-19

## TL;DR

This study identifies and characterizes microRNAs in the stingless bee Melipona quadrifasciata, providing insights into their potential roles in development and reproduction.

## Contribution

The first comprehensive identification of miRNAs in stingless bees using deep sequencing of small RNAs.

## Key findings

- 193 high-confidence mature miRNAs were identified, including 106 unique to Melipona quadrifasciata.
- mqu-miR-1 and mqu-miR-276 together accounted for over 70% of miRNA reads, indicating their central roles.
- Comparative analysis showed higher conservation of miRNAs with other Hymenopterans like Apis mellifera and Bombus spp.

## Abstract

MicroRNAs (miRNAs) are key post-transcriptional regulators involved in a wide range of biological processes in insects, yet little is known about their roles in stingless bees. Here, we present the first characterization of miRNAs in Melipona quadrifasciata using small RNAs (sRNAs) deep sequencing. A total of 193 high-confidence mature miRNAs were identified, including 106 M. quadrifasciata-exclusive sequences. Expression profiling revealed that mqu-miR-1 and mqu-miR-276 together accounted for over 70% of all miRNA reads, suggesting their central roles in development and reproduction. Comparative analyses showed a higher conservation of M. quadrifasciata miRNAs with other Hymenopterans, especially Apis mellifera and Bombus spp. Putative target genes were predicted using a consensus approach, and functional annotation indicated their involvement in diverse biological regulatory pathways. This work represents the first comprehensive identification of the miRNA repertoire in stingless bees using sRNAs and provides a valuable foundation for understanding miRNA-mediated gene regulation in this ecologically and economically important pollinator.

## Linked entities

- **Species:** Melipona quadrifasciata (taxon 166423), Apis mellifera (taxon 7460)

## Full-text entities

- **Genes:** Mir276 (microRNA mir-276) [NCBI Gene 732500] {aka Mirn276}
- **Species:** Melipona quadrifasciata (species) [taxon 166423], Scaptotrigona postica (stingless bee, species) [taxon 79011], Apis mellifera (bee, species) [taxon 7460], Bombus (subgenus) [taxon 144708]

## Full text

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## Figures

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## References

55 references — full list in the complete paper: https://tomesphere.com/paper/PMC12196327/full.md

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Source: https://tomesphere.com/paper/PMC12196327