# Polychlorinated Biphenyl Exposure Alters tRNA Transcriptome in High-Fat Diet-Fed Mouse Liver

**Authors:** Carolyn M. Klinge, Julia H. Chariker, Kellianne M. Piell, Belinda J. Petri, Eric C. Rouchka, Matthew C. Cave

PMC · DOI: 10.3390/ncrna11030041 · Non-Coding RNA · 2025-05-22

## TL;DR

Exposure to PCBs in mice on a high-fat diet changes liver tRNA levels and fragments, possibly affecting protein production.

## Contribution

This study reveals novel PCB-induced alterations in tRNA transcriptomes and tRFs in mouse liver.

## Key findings

- PCB exposures produced distinct hepatic tRNA transcriptomes with more tRNAs decreased than increased.
- Four tRF-3s were upregulated in PCB126 and Ar1260 + PCB126 co-exposed mice.
- PCB-associated tRNA modifications correspond to previously reported modification sites.

## Abstract

Background/Objectives: Exposure of high-fat diet (HFD)-fed mice to polychlorinated biphenyls (PCBs) results in metabolic dysfunction-associated steatotic liver disease (MASLD) and progression to metabolic dysfunction-associated steatohepatitis (MASH). The mechanisms by which HFD diet and PCBs increase MASLD are unclear. Previously, we identified differences in HFD-fed mouse liver tRNA modifications with single oral exposures to the dioxin-like PCB126, the non-dioxin-like PCB mixture Aroclor 1260 (Ar1260), or the combination of Ar1260 + PCB126. Methods: Here, we used small RNA sequencing and the tRNA analysis of expression (tRAX) pipeline to examine if PCB exposures alter the tRNA transcriptome, including tRNA-derived fragments (tRFs), in the livers of the PCB-exposed mice. Results: Each PCB exposure produced distinct hepatic tRNA transcriptomes with more tRNAs decreased than increased. Only tRNA-Glu-TTC-1 was reduced with all three PCB exposures. More changes in tRFs were identified with Ar1260 alone or in combination with PCB126 than with PCB126 alone. Four tRF-3s were upregulated in both PCB126 and Ar1260 + PCB126 co-exposed mice, suggesting PCB126 as responsible for this increase. We previously reported that PCB126 exposure increased hepatic Angiogenin (ANG) protein which generates tRF-3s. Four previously reported tRNA modifications corresponded to positions of PCB-associated tRNA modifications identified by tRAX: m1A, m6A, ms2t6A, and Ψ. Conclusions: Overall, the differences in hepatic tRNAs and tRFs with three different PCB exposures suggest that PCB exposures play an unexplored role in regulating translation in mouse liver.

## Linked entities

- **Genes:** LOC102930967 (angiogenin-2) [NCBI Gene 102930967], ANG (angiogenin) [NCBI Gene 283]
- **Proteins:** LOC102930967 (angiogenin-2), ANG (angiogenin)
- **Chemicals:** PCB126 (PubChem CID 63090), Aroclor 1260 (PubChem CID 38018)
- **Diseases:** metabolic dysfunction-associated steatotic liver disease (MONDO:0013209), MASLD (MONDO:0013209), metabolic dysfunction-associated steatohepatitis (MONDO:0007027), MASH (MONDO:0007027)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** TrnI (tRNA-Ile) [NCBI Gene 17733], Ang (angiogenin, ribonuclease, RNase A family, 5) [NCBI Gene 11727] {aka Ang1, Rnase5, Rnase5a}
- **Diseases:** MASH (MESH:D005234), metabolic dysfunction (MESH:D008659), MASLD (MESH:D008107)
- **Chemicals:** PCB (MESH:D011078), dioxin (MESH:D004147), Fat (MESH:D005223), PCB126 (MESH:C023035), Ar1260 (MESH:C026987)
- **Species:** Mus musculus (house mouse, species) [taxon 10090]

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12195632/full.md

## References

88 references — full list in the complete paper: https://tomesphere.com/paper/PMC12195632/full.md

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Source: https://tomesphere.com/paper/PMC12195632