# Discovery of Novel Phenolic Compounds from Eutypa lata Through OSMAC Approach: Structural Elucidation and Antibiotic Potential

**Authors:** Ana Cotán, Inmaculada Izquierdo-Bueno, Abdellah Ezzanad, Laura Martín, Manuel Delgado, Isidro G. Collado, Cristina Pinedo-Rivilla

PMC · DOI: 10.3390/ijms26125774 · International Journal of Molecular Sciences · 2025-06-16

## TL;DR

This study discovers new phenolic compounds from the grapevine pathogen Eutypa lata using the OSMAC method and tests their phytotoxic and antibacterial properties.

## Contribution

The study reports four newly identified compounds from Eutypa lata and evaluates their antibiotic potential against bacteria.

## Key findings

- Four new compounds were identified, including eulatagalactoside A and three others not previously reported in the literature.
- Eulatagalactoside A showed phytotoxic effects on Phaseolus vulgaris after 48 hours.
- Two compounds exhibited significant antibacterial activity against Gram-positive bacteria like Staphylococcus aureus.

## Abstract

Among grapevine trunk diseases, Eutypa dieback, caused by the fungus Eutypa lata, is one of the most critical ones, due to its widespread infection in vineyards and the lack of effective treatments. This fungus is a vascular pathogen that enters grapevines through pruning wounds. The infection process is associated with phytotoxic metabolites produced by the fungus, and as such, the identification of new metabolites from different culture conditions and broths could provide valuable insights into the fungus’s enzymatic system and help its control. For the purposes of this study, the OSMAC (one strain, many compounds) approach was applied to investigate the secondary metabolism of E. lata strain 311 isolated from Vitis vinifera plants in Spain. A total of twenty metabolites were isolated, including five reported for the first time from E. lata and four that are newly identified compounds in the literature: eulatagalactoside A, (R)-2-(4′-hydroxy-3′-methylbut-1′-yn-1′-yl)-4-(hydroxymethyl)phenol, (S)-7-hydroxymethyl-3-methyl-2,3-dihydro-1-benzoxepin-3-ol, and (3aR,4S,5R,7aS)-4,5-dihydroxy-6-((R)-3′-methylbuta-1′,3′-dien-1′-ylidene)hexahydrobenzo[d][1,3]dioxol-2-one. These compounds were extracted from fermentation broths using silica gel column chromatography and high-performance liquid chromatography (HPLC). Their structures were elucidated through extensive 1D and 2D NMR spectroscopy, along with high-resolution electrospray ionization mass spectrometry (HRESIMS). Compounds were evaluated for phytotoxicity against Phaseolus vulgaris, with only eulatagalactoside A producing white spots after 48 h. Additionally, the antibacterial activity against Escherichia coli, Staphylococcus aureus, and Klebsiella pneumoniae of selected compounds was tested. The compounds (R)-2-(4′-hydroxy-3′-methylbut-1′-yn-1′-yl)-4-(hydroxymethyl)phenol and (S)-7-(hydroxymethyl)-3-methyl-2,3-dihydrobenzo[b]oxepin-3-ol showed the most significant antimicrobial activity against Gram-positive bacteria, inhibiting S. aureus by over 75%, with IC50 values of 511.4 µg/mL and 617.9 µg/mL, respectively.

## Linked entities

- **Species:** Eutypa lata (taxon 97096), Vitis vinifera (taxon 29760), Phaseolus vulgaris (taxon 3885), Escherichia coli (taxon 562), Staphylococcus aureus (taxon 1280), Klebsiella pneumoniae (taxon 573)

## Full-text entities

- **Diseases:** trunk diseases (MESH:D016750), infection (MESH:D007239)
- **Chemicals:** silica (MESH:D012822), (R)-2-(4'-hydroxy-3'-methylbut-1'-yn-1'-yl)-4-(hydroxymethyl)phenol (-)
- **Species:** Eutypa lata (species) [taxon 97096], Escherichia coli (E. coli, species) [taxon 562], Staphylococcus aureus (species) [taxon 1280], Phaseolus vulgaris (common bean, species) [taxon 3885], Klebsiella pneumoniae (species) [taxon 573], Vitis vinifera (wine grape, species) [taxon 29760]

## Full text

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## Figures

16 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12193298/full.md

## References

89 references — full list in the complete paper: https://tomesphere.com/paper/PMC12193298/full.md

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Source: https://tomesphere.com/paper/PMC12193298