# Identification of Splicing Regulatory Activity of ATXN1 and Its Associated Domains

**Authors:** Ai Ohki, Masahide Kato, Yoshitaka Aoki, Arisa Kubokawa, Motoaki Yanaizu, Yoshihiro Kino

PMC · DOI: 10.3390/biom15060782 · Biomolecules · 2025-05-28

## TL;DR

This study shows that ATXN1, a protein linked to SCA1, regulates alternative splicing, with its splicing activity involving specific domains and RNA binding.

## Contribution

The study identifies the central region of ATXN1 as a novel RNA-binding and splicing regulatory domain.

## Key findings

- ATXN1 regulates alternative splicing of several minigenes.
- The AXH domain and a nuclear localization signal in the C-terminal region are involved in splicing regulation.
- The central region of ATXN1 mediates RNA binding and shows weak but significant splicing regulation.

## Abstract

The expansion of the polyglutamine tract in ATXN1 contributes to the pathogenesis of SCA1. ATXN1 functions as a transcriptional regulator that interacts with multiple transcription factors, and transcriptional dysregulation has been observed in SCA1. In addition, splicing dysregulation has been identified in cells derived from SCA1 patients and model mouse tissues. Although ATXN1 binds to RNA and splicing factors, its direct involvement in pre-mRNA splicing remains unclear. Here, we demonstrate that ATXN1 regulates the alternative splicing of several minigenes. Using an Mbnl1 minigene, we found that neither expansion nor deletion of the polyglutamine tract affected ATXN1-mediated splicing regulation. Deletion analysis revealed that its splicing regulatory activity involves a central region of ATXN1, the AXH domain, and a nuclear localization signal in the C-terminal region. The AXH domain alone failed to exhibit splicing regulatory activity, whereas the central region demonstrated weak but significant splicing regulation. Full regulatory function required at least one of these regions, suggesting their redundant role in splicing modulation. Importantly, we newly identified the central region as mediating RNA binding. These findings suggest a novel role for ATXN1 in alternative splicing, providing new insights into the mechanisms underlying SCA1 pathogenesis.

## Linked entities

- **Genes:** ATXN1 (ataxin 1) [NCBI Gene 6310], MBNL1 (muscleblind like splicing regulator 1) [NCBI Gene 4154]
- **Proteins:** ATXN1 (ataxin 1)
- **Diseases:** SCA1 (MONDO:0008119)

## Full-text entities

- **Genes:** MBNL1 (muscleblind like splicing regulator 1) [NCBI Gene 4154] {aka EXP, MBNL}, ATXN1 (ataxin 1) [NCBI Gene 6310] {aka ATX1, D6S504E, SCA1}
- **Diseases:** SCA1 (MESH:D020754)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12191242/full.md

## References

34 references — full list in the complete paper: https://tomesphere.com/paper/PMC12191242/full.md

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Source: https://tomesphere.com/paper/PMC12191242