mSphere of Influence: Adapting new models for studying Toxoplasma gondii gut interactions
Carlos J. Ramírez-Flores

TL;DR
This paper discusses how recent studies on Toxoplasma gondii's gut interactions influenced a researcher's approach to studying the parasite's host barrier crossing.
Contribution
Highlights the impact of three recent papers on reshaping understanding of Toxoplasma gondii's intestinal interactions and inspiring new experimental methods.
Findings
Three recent papers reshaped the author's view of Toxoplasma gondii's earliest intestinal events.
The work inspired the use of gut-on-chip platforms for studying host-parasite interactions.
The studies built on Dubey’s foundational mouse work in the field of parasitology.
Abstract
Carlos J. Ramírez-Flores works in the field of parasitology, focusing on how Toxoplasma gondii crosses host barriers. In this mSphere of Influence article, he reflects on how three papers—by Shim, Kim, and Gregg—built on Dubey’s foundational mouse work to reshape his view of the parasite’s earliest intestinal events and to inspire his use of gut-on-chip platforms.
Genes, proteins, chemicals, diseases, species, mutations and cell lines named across the full text — each resolved to its canonical identifier and authoritative record.
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Taxonomy
TopicsToxoplasma gondii Research Studies
COMMENTARY
From plaques to chips
Nearly 30 years ago, J. P. Dubey showed that orally ingested Toxoplasma gondii oocysts invade the mouse small intestine, breaching enterocytes within hours and spreading from discrete foci to systemic infection (1). That classic work crystallized key questions that still vex us. How does the parasite traverse the intestinal barrier? Which host cues trigger its conversion from bradyzoites to tachyzoites, and how early does immune evasion begin? While animal studies map gross pathology, they struggle to isolate micro-domains of infection or to capture real-time dynamics at the epithelium–lamina propria interface. Ethical limits on human sampling compound the problem. Three papers published between 2013 and 2023 convinced me that new microphysiological and imaging approaches could finally illuminate this black box (2–4).
What they discovered
Gregg et al. (2) revived Dubey’s oral infection model and, using multiphoton microscopy and flow cytometry, charted parasite loads along the duodenum, jejunum, and ileum during the first week (2). They revealed “multi-villus plaques”—expanding infection zones that foreshadow systemic spread and link tissue geography to disease outcome. Four years later, Shim et al. (3) engineered a microfluidic gut-on-a-chip whose collagen scaffolds protrude into the channel as three-dimensional villi (3). Although developed for drug-absorption studies, the device reproduced shear stress, brush-border maturation, and tight-junction integrity so faithfully that it immediately suggested a Toxoplasma-ready stage: a place where parasites could encounter villus tips under near-physiological flow. Kim et al. (4) seized that opportunity, stacking endothelial layers in a tri-channel chip and capturing tachyzoites as they pierced the endothelial barrier (4). Taken together, these models—traditional histology, 3D villus chips, and real-time transmigration assays—underline a single principle: micro-scale conditions set macro-scale disease. Early events at the intestinal interface, captured either as electrical drops in vitro or inflammatory plaques in vivo, decide how far and fast the parasite spreads.
How they changed me
Gregg’s meticulous sectioning showed me that spatial mapping can still reveal surprises in a classic model; the notion of infection “plaques” became my mental template for early Toxoplasma biology. At the same time, I felt an urgent need for a system that could expose events impossible—or at least extremely difficult—to visualize in mice. Shim’s villus chip proved that organ-level geometry and physiological shear can be recreated ex vivo, convincing me that micro-engineering would let us witness the first dialog between parasite and epithelium without opening a mouse. Kim’s barrier-crossing device turned that promise into reality: it transformed the once-static concept of transmigration into measurable kinetics and demonstrated that on-chip analysis of Toxoplasma infection is feasible. These papers pulled me from a purely biological mindset into a multidisciplinary arena where biofabrication, live imaging, and parasitology intersect.
Where do we go next
Human gut-on-chip platforms allow for the incorporation of oxygen gradients, commensal microbiota, and a variety of human-derived cells (5–7), while in vivo plaque mapping is now paired with single-cell transcriptomics (8). Fueled by these advances, my laboratory is adapting 3D models and villus-mimetic scaffolds to follow bradyzoite and tachyzoite dynamics in real time and to test how Toxoplasma manipulates its host to modulate early dissemination.
The reference list from the paper itself. Each links out to its DOI / PubMed record.
- 1Speer CA, Dubey JP. 1998. Ultrastructure of early stages of infections in mice fed Toxoplasma gondii oocysts. Parasitology 116 (Pt 1):35–42. doi:10.1017/s 00311820970019599481772 · doi ↗ · pubmed ↗
- 2Gregg B, Taylor BC, John B, Tait-Wojno ED, Girgis NM, Miller N, Wagage S, Roos DS, Hunter CA. 2013. Replication and distribution of Toxoplasma gondii in the small intestine after oral infection with tissue cysts. Infect Immun 81:1635–1643. doi:10.1128/IAI.01126-1223460516 PMC 3647985 · doi ↗ · pubmed ↗
- 3Shim K-Y, Lee D, Han J, Nguyen N-T, Park S, Sung JH. 2017. Microfluidic gut-on-a-chip with three-dimensional villi structure. Biomed Microdevices 19:37. doi:10.1007/s 10544-017-0179-y 28451924 · doi ↗ · pubmed ↗
- 4Kim H, Hong S-H, Jeong HE, Han S, Ahn J, Kim J-A, Yang J-H, Oh HJ, Chung S, Lee S-E. 2022. Microfluidic model for in vitro acute Toxoplasma gondii infection and transendothelial migration. Sci Rep 12:11449. doi:10.1038/s 41598-022-15305-435794197 PMC 9259589 · doi ↗ · pubmed ↗
- 5Ballerini M, Galiè S, Tyagi P, Catozzi C, Raji H, Nabinejad A, Macandog ADG, Cordiale A, Slivinschi BI, Kugiejko KK, Freisa M, Occhetta P, Wargo JA, Ferrucci PF, Cocorocchio E, Segata N, Vignati A, Morgun A, Deleidi M, Manzo T, Rasponi M, Nezi L. 2025. A gut-on-a-chip incorporating human faecal samples and peristalsis predicts responses to immune checkpoint inhibitors for melanoma. Nat Biomed Eng. doi:10.1038/s 41551-024-01318-z PMC 1217666039939548 · doi ↗ · pubmed ↗
- 6Valiei A, Aminian-Dehkordi J, Mofrad MRK. 2023. Gut-on-a-chip models for dissecting the gut microbiology and physiology. APL Bioeng 7:011502. doi:10.1063/5.012654136875738 PMC 9977465 · doi ↗ · pubmed ↗
- 7Liu J, Lu R, Zheng X, Hou W, Wu X, Zhao H, Wang G, Tian T. 2023. Establishment of a gut-on-a-chip device with controllable oxygen gradients to study the contribution of Bifidobacterium bifidum to inflammatory bowel disease. Biomater Sci 11:2504–2517. doi:10.1039/d 2bm 01490 d 36779280 · doi ↗ · pubmed ↗
- 8Yin J, Zhao Z, Huang J, Xiao Y, Rehmutulla M, Zhang B, Zhang Z, Xiang M, Tong Q, Zhang Y. 2023. Single-cell transcriptomics reveals intestinal cell heterogeneity and identifies Ep 300 as a potential therapeutic target in mice with acute liver failure. Cell Discov 9:77. doi:10.1038/s 41421-023-00578-437488127 PMC 10366100 · doi ↗ · pubmed ↗
