# Generation of the ICGi019-B-1 and ICGi019-B-2 lines via correction of the p.Met659Ile (c.1977G>A) variant in MYH7 of patient-specific induced pluripotent stem cells using CRISPR/Cas9

**Authors:** A.E. Shulgina, S.V. Pavlova, J.M. Minina, S.M. Zakian, E.V. Dementyeva

PMC · DOI: 10.18699/vjgb-25-38 · 2025-06-01

## TL;DR

Researchers corrected a genetic variant in patient-derived stem cells using CRISPR/Cas9 to study its role in heart disease.

## Contribution

Generated and characterized isogenic iPSC lines with corrected MYH7 variant for studying hypertrophic cardiomyopathy.

## Key findings

- Corrected iPSC lines showed normal pluripotency markers and morphology.
- No CRISPR/Cas9 off-target effects were detected in the corrected lines.
- Lines retained normal karyotype and can serve as isogenic controls for pathogenicity studies.

## Abstract

The problem of interpretation of the genetic data from patients with inherited cardiovascular diseases still remains relevant. To date, the clinical significance of approximately 40 % of variants in genes associated with inherited cardiovascular diseases is uncertain, which requires new approaches to the assessment of their pathogenetic contribution. A combination of the induced pluripotent stem cell (iPSC) technology and editing the iPSC genome with CRISPR/Cas9 is thought to be the most promising tool for clarifying variant pathogenicity. A variant of unknown significance in MYH7, p.Met659Ile (c.1977G>A), was previously identified in several genetic screenings of hypertrophic cardiomyopathy patients. In this study, the single nucleotide substitution was corrected with CRISPR/Cas9 in iPSCs generated from a carrier of the variant. As a result, two iPSC lines (ICGi019-B-1 and ICGi019-B-2) were generated and characterized using a standard set of methods. The iPSC lines with the corrected p.Met659Ile (c.1977G>A) variant in MYH7 possessed a morphology characteristic of human pluripotent cells, expressed markers of the pluripotent state (the OCT4, SOX2, NANOG transcription factors and SSEA-4 surface antigen), were able to give rise to derivatives of three germ layers during spontaneous differentiation, and retained a normal karyotype (46,XY). No CRISPR/Cas9 off-target activity was found in the ICGi019-B-1 and ICGi019-B-2 iPSC lines. The maintenance of the pluripotent state and normal karyotype and the absence of CRISPR/Cas9 off-target activity in the iPSC lines with the corrected p.Met659Ile (c.1977G>A) variant in MYH7 allow using the iPSC lines as an isogenic control for further studies of the variant pathogenicity and its impact on the hypertrophic cardiomyopathy development.

## Linked entities

- **Genes:** MYH7 (myosin heavy chain 7) [NCBI Gene 4625], POU5F1 (POU class 5 homeobox 1) [NCBI Gene 5460], SOX2 (SRY-box transcription factor 2) [NCBI Gene 6657], NANOG (Nanog homeobox) [NCBI Gene 79923]
- **Diseases:** hypertrophic cardiomyopathy (MONDO:0005045)

## Full-text entities

- **Genes:** SOX2 (SRY-box transcription factor 2) [NCBI Gene 6657] {aka ANOP3, MCOPS3}, NANOG (Nanog homeobox) [NCBI Gene 79923], MYH7 (myosin heavy chain 7) [NCBI Gene 4625] {aka CMD1S, CMH1, CMYO7A, CMYO7B, CMYP7A, CMYP7B}, POU5F1 (POU class 5 homeobox 1) [NCBI Gene 5460] {aka OCT3, OCT4, OCT4Borf1, OTF-3, OTF3, OTF4}
- **Diseases:** hypertrophic cardiomyopathy (MESH:D002312), inherited cardiovascular diseases (MESH:D030342)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** c.1977G>A
- **Cell lines:** ICGi019 — Homo sapiens (Human), Familial hypertrophic cardiomyopathy type 1, Induced pluripotent stem cell (CVCL_ZA52)

## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12183560/full.md

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Source: https://tomesphere.com/paper/PMC12183560