# Time restricted feeding with or without ketosis influences metabolism-related gene expression in a tissue-specific manner in aged rats

**Authors:** Sarah Ding, Anisha Banerjee, Sara N. Burke, Abbi R. Hernandez

PMC · DOI: 10.1007/s11357-025-01632-7 · GeroScience · 2025-03-28

## TL;DR

This study shows that different diets affect gene expression in the brain and liver of aged rats, influencing metabolism and cognitive performance.

## Contribution

The study reveals tissue-specific gene expression changes due to time-restricted feeding with or without ketosis in aged rats.

## Key findings

- kTRF-fed rats showed reduced SIRT1 and MAPK8 in the brain's CA3 region.
- cTRF-fed rats had increased IGF1 in the brain's CA1, which was reduced in kTRF-fed rats.
- kTRF-fed rats had lower AKT and FOXO1 in the liver, but higher AKT in the brain correlated with better cognitive performance.

## Abstract

Many of the “hallmarks of aging” involve alterations in cellular and organismal metabolism. One pathway with the potential to impact several traditional markers of impaired function with aging is the PI3K/AKT metabolic pathway. Regulation of this pathway includes many aspects of cellular function, including protein synthesis, proliferation, and survival, as well as many downstream targets, including mTOR and FOXOs. Importantly, this pathway is pivotal to the function of every organ system in the human body. Thus, we investigated the expression of several genes along this pathway in multiple organs, including the brain, liver, and skeletal muscle, in aged subjects that had been on different experimental diets to regulate metabolic function since mid-life. Specifically, rats were fed a control ad lib diet (AL), a time restricted feeding diet (cTRF), or a time restricted feeding diet with ketogenic macronutrients (kTRF) for the majority of their adult lives (from 8 to 25 months). We previously reported that regardless of macronutrient ratio, TRF-fed rats in both macronutrient groups required significantly less training to acquire a biconditional association task than their ad lib fed counterparts. The current experiments expand on this work by quantifying metabolism-related gene expression across tissues and interrogating for potential relationships with cognitive performance. Within the brain, SIRT1 and MAPK8 were reduced in CA3 of kTRF-fed rats. Additionally, IGF1 expression was significantly upregulated in the CA1 of cTRF-fed rats, but this effect was ameliorated in the kTRF fed group. AKT and FOXO1 expression were significantly reduced in kTRF-fed rats within liver. Interestingly, AKT expression within the perirhinal cortex (PER) was higher in kTRF rats with the best cognitive performance, and FOXO1 expression was higher in the CA3 of AL-fed rats correlated with the poorest cognitive performance. Together, these data demonstrate diet- and tissue-specific alterations in metabolism-related gene expression and their correlation with cognitive status.

## Linked entities

- **Genes:** PIK3CA (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) [NCBI Gene 5290], AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207], MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475], SIRT1 (sirtuin 1) [NCBI Gene 23411], MAPK8 (mitogen-activated protein kinase 8) [NCBI Gene 5599], IGF1 (insulin like growth factor 1) [NCBI Gene 3479], AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207], FOXO1 (forkhead box O1) [NCBI Gene 2308]
- **Species:** Rattus norvegicus (taxon 10116)

## Full-text entities

- **Genes:** Mapk8 (mitogen-activated protein kinase 8) [NCBI Gene 116554] {aka JNK}, Foxo1 (forkhead box O1) [NCBI Gene 84482] {aka Fkhr, Foxo1a}, Mtor (mechanistic target of rapamycin kinase) [NCBI Gene 56718] {aka Frap1, RAFT1}, Sirt1 (sirtuin 1) [NCBI Gene 309757] {aka Sir2}, Akt1 (AKT serine/threonine kinase 1) [NCBI Gene 24185] {aka Akt}, Igf1 (insulin-like growth factor 1) [NCBI Gene 24482] {aka IGF}
- **Diseases:** ketosis (MESH:D007662)
- **Chemicals:** kTRF (-)
- **Species:** Homo sapiens (human, species) [taxon 9606], Rattus norvegicus (brown rat, species) [taxon 10116]

## Full text

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## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12181561/full.md

## References

10 references — full list in the complete paper: https://tomesphere.com/paper/PMC12181561/full.md

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Source: https://tomesphere.com/paper/PMC12181561