# GPD1L downregulation in colorectal cancer: a novel obesity-related biomarker linking metabolic dysregulation to tumor progression

**Authors:** Feng Zhu, Huiyuan Li, Hongzhang Liu, Yusheng Wang

PMC · DOI: 10.3389/fonc.2025.1582728 · Frontiers in Oncology · 2025-06-05

## TL;DR

This study identifies GPD1L as a tumor suppressor in colorectal cancer, linking its downregulation to cancer progression and metabolic dysregulation.

## Contribution

GPD1L is newly proposed as an obesity-related biomarker and tumor suppressor in colorectal cancer.

## Key findings

- GPD1L expression is significantly lower in tumor tissues compared to non-neoplastic tissues.
- Overexpression of GPD1L reduces cancer cell proliferation, migration, and invasion.
- GPD1L downregulation correlates with increased HIF-1α and MMP9 expression in CRC.

## Abstract

To delineate the expression profile and tumor-suppressive function of the metabolism-associated gene GPD1L in colorectal carcinogenesis. Methods: Transcriptomic datasets from TCGA and GEO repositories (GSE74602, GSE113513, GSE164191) were computationally analyzed. Paired tumor/adjacent mucosal specimens (n=58) from CRC patients at Jincheng People’s Hospital were analyzed alongside the NCM460 colon epithelial line and five CRC lines (SW620, HCT116, SW480, DLD-1, LOVO). Following GPD1L quantification via qPCR, selected cell models underwent pcDNA3.1-GPD1L transfection for functional characterization. Then Western blot analysis was used to explore its possible mechanism.

Comparative analysis revealed a marked elevation of GPD1L expression in non-neoplastic tissues relative to tumor specimens (P<0.001). Transcriptional profiling further identified significant depletion of GPD1L mRNA levels across malignant cell lines versus the NCM460 epithelial reference (P<0.05), with HCT116/SW620 showing maximal downregulation. Ectopic GPD1L expression attenuated oncogenic phenotypes: proliferation decreased (P<0.001), while Transwell quantification revealed 46.0% (HCT116: 605.0 ± 9.2 vs 326.7 ± 8.50 cells/field) and 54.3% (SW620: 455.3 ± 17.2 vs 208.0 ± 14.0 cells/field) reductions in migratory capacity (both P<0.001). Invasion assays showed parallel inhibition (HCT116: 43.3% decrease, P<0.01; SW620: 54.8% decrease, P<0.001). After overexpression of GPD1L, the expression levels of HIF-1α and MMP9 were reduced (P<0.05).

GPD1L downregulation represents a hallmark of CRC progression, with affecting the expression of HIF-1α and MMP9 significantly impeding malignant behaviors, nominating it as a candidate tumor suppressor in colorectal neoplasia.

## Linked entities

- **Genes:** GPD1L (glycerol-3-phosphate dehydrogenase 1 like) [NCBI Gene 23171], HIF1A (hypoxia inducible factor 1 subunit alpha) [NCBI Gene 3091], MMP9 (matrix metallopeptidase 9) [NCBI Gene 4318]
- **Diseases:** colorectal cancer (MONDO:0005575)

## Full-text entities

- **Genes:** GPD1L (glycerol-3-phosphate dehydrogenase 1 like) [NCBI Gene 23171] {aka GPD1-L}, HIF1A (hypoxia inducible factor 1 subunit alpha) [NCBI Gene 3091] {aka HIF-1-alpha, HIF-1A, HIF-1alpha, HIF1, HIF1-ALPHA, MOP1}, MMP9 (matrix metallopeptidase 9) [NCBI Gene 4318] {aka CLG4B, GELB, MANDP2, MMP-9}
- **Diseases:** CRC (MESH:D015179), colorectal neoplasia (MESH:D009369), metabolic (MESH:D008659), obesity (MESH:D009765), colorectal carcinogenesis (MESH:D063646)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** HCT116 — Homo sapiens (Human), Colon carcinoma, Cancer cell line (CVCL_0291), NCM460 — Homo sapiens (Human), Spontaneously immortalized cell line (CVCL_0460), SW480 — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_0546), LOVO — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_0399), DLD-1 — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_0248), HCT116/SW620 — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_0547)

## Full text

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## Figures

10 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12177464/full.md

## References

26 references — full list in the complete paper: https://tomesphere.com/paper/PMC12177464/full.md

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Source: https://tomesphere.com/paper/PMC12177464