# Arsenic Accumulation in Microbial Biomass and the Interpretation of Signals of Early Arsenic‐Based Metabolisms

**Authors:** David Madrigal‐Trejo, Matthew J. Baldes, Nobumichi Tamura, Vanja Klepac‐Ceraj, Tanja Bosak

PMC · DOI: 10.1111/gbi.70024 · Geobiology · 2025-06-13

## TL;DR

This study investigates how arsenic accumulates in microbial biofilms and how it can be used to interpret ancient microbial activity involving arsenic.

## Contribution

The study clarifies whether arsenic accumulation in microbialites is due to biological activity or postmortem processes.

## Key findings

- Biomass accumulates arsenic in a concentration-dependent manner, preferring oxidized As(V) over As(III).
- Autoclaved biomass accumulates more arsenic than active biomass due to the absence of detoxification.
- X-ray techniques can detect arsenic enrichments in microbial biomass, aiding in the analysis of ancient microbialites.

## Abstract

Carbonaceous particles that concentrate arsenic in microbialites as old as ~3.5 Ga are similar to As‐rich organic globules in modern microbialites. The former particles have been interpreted as tracers of As cycling by early microbial metabolisms. However, it is unclear if arsenic accumulation is a consequence of biological activity or passive postmortem binding of arsenic by organic matter during diagenesis in volcanically influenced, As‐rich environments. Here, we address this uncertainty by evaluating the concentrations, speciation, and detectability of As in active or heat‐killed biofilms formed by cyanobacteria or anoxygenic photosynthetic microbes exposed to environmentally relevant concentrations of As(III) or As(V) (50 μM to 3 mM). The genomes or metagenomes of these biofilms contain genes involved in detoxifying or energy‐yielding As metabolisms. Biomass accumulates As from the solution in a concentration‐dependent manner and with a preference for oxidized As(V) over As(III). Autoclaved biomass accumulates As even more strongly than active biomass, likely because living biofilms actively detoxify As. Active biofilms oxidize and reduce As and accumulate both As(III) and As(V), whereas a small fraction of As(V) can be reduced in inactive biofilms that bind As during diagenesis. Arsenic enrichments in the biomass are detectable by X‐ray based spectroscopy techniques (XRF, EPMA‐WDS) that are commonly used to analyze geological materials. These findings enable the reconstruction of past active and passive interactions of microbial biomass with arsenic in fossilized microbial biofilms and microbialites from the early Earth.

## Linked entities

- **Chemicals:** As(V) (PubChem CID 16076883)

## Full-text entities

- **Chemicals:** Arsenic (MESH:D001151), As(V) (MESH:C571889), As(III) (-)

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12165603/full.md

## References

99 references — full list in the complete paper: https://tomesphere.com/paper/PMC12165603/full.md

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Source: https://tomesphere.com/paper/PMC12165603