# Exploring the structural landscape of universal stress proteins in Archaea

**Authors:** L. Matarredona, M.J. García-Bonete, B. Zafrilla, J. Esclapez

PMC · DOI: 10.1007/s11274-025-04439-y · World Journal of Microbiology & Biotechnology · 2025-06-11

## TL;DR

This paper reviews the structure and function of universal stress proteins in Archaea, focusing on how they help these organisms survive harsh environments and their potential for biotechnology.

## Contribution

The paper provides a comprehensive structural and functional analysis of USPs in Archaea, emphasizing their biotechnological potential.

## Key findings

- USPs in Archaea are crucial for surviving environmental stresses like oxidative stress and heavy metal toxicity.
- Structural studies of USPs from halophilic and thermophilic Archaea reveal insights into their functional mechanisms.
- USPs in Archaea have potential applications in protein engineering and industrial processes.

## Abstract

The universal stress protein (USP) superfamily is widely distributed in the three domains of life. These proteins play a key role in the cell response to biotic and abiotic stresses. Although the discovery of the first USP was more than 30 years ago, little is known about its specific function and the molecular mechanisms underlying it. Focusing on the Archaea domain, USPs represent one of the mechanisms developed to survive under environmental stresses, such as nutritional deprivation, oxidative stress, or heavy metal toxicity. This review provides a comprehensive understanding of USPs in this domain, with a focus on their structure and function. It delves into the distribution of USPs in several families of Archaea and explores the structures of selected USPs, paying special attention to those of halophilic and thermophilic microorganisms. Additionally, the biotechnological implications of USPs in Archaea are examined, highlighting their potential in protein engineering and the development of novel biotechnological applications. Understanding the structure and function of USPs will expedite the development of improved industrial processes and contribute to the advancement of innovative medical therapies.

The online version contains supplementary material available at 10.1007/s11274-025-04439-y.

## Linked entities

- **Species:** Archaea (taxon 2157)

## Full-text entities

- **Genes:** UspA [NCBI Gene 7324500]
- **Diseases:** infection (MESH:D007239), toxicity (MESH:D064420), heavy metal toxicity (MESH:D000075322)
- **Chemicals:** lysine (MESH:D008239), phosphate (MESH:D010710), glycine (MESH:D005998), MJ0577 (-), amino acid (MESH:D000596), heavy metal (MESH:D019216), carbon (MESH:D002244), salt (MESH:D012492), oxygen (MESH:D010100), nitrate (MESH:D009566), nitrogen (MESH:D009584), divalent cation (MESH:D002413), ATP (MESH:D000255), iron (MESH:D007501)
- **Species:** Archaeoglobus fulgidus (species) [taxon 2234], Thermoproteota (phylum) [taxon 28889], Escherichia coli (E. coli, species) [taxon 562], Methanobacteriaceae (family) [taxon 2159], Haloferax mediterranei (species) [taxon 2252], Sulfolobus acidocaldarius (species) [taxon 2285], Synechocystis (genus) [taxon 1142], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Homo sapiens (human, species) [taxon 9606], Salmonella enterica subsp. enterica serovar Typhimurium (no rank) [taxon 90371], Acinetobacter baumannii (species) [taxon 470], Methanobacteriota (euryarchaeotes, phylum) [taxon 28890], Methanocaldococcus jannaschii (species) [taxon 2190], Rhodophyta (red algae, phylum) [taxon 2763], Halomonas elongata (species) [taxon 2746], Halobacterium (genus) [taxon 2239], Listeria monocytogenes (species) [taxon 1639], Mycobacterium tuberculosis (species) [taxon 1773]
- **Cell lines:** I3R6M7 — Mus musculus (Mouse), Hybridoma (CVCL_G621)

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12159084/full.md

## References

3 references — full list in the complete paper: https://tomesphere.com/paper/PMC12159084/full.md

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Source: https://tomesphere.com/paper/PMC12159084