# Case Report: Extrarenal TFE3 fusion-related renal cell carcinoma

**Authors:** Zhouliang Yang, Ting Li, Kejun Lv, Xiaowei Zhang

PMC · DOI: 10.3389/fonc.2025.1592042 · Frontiers in Oncology · 2025-05-29

## TL;DR

This case report describes a rare extrarenal TFE3 fusion-related kidney cancer in a young woman, highlighting its aggressive nature and the importance of molecular testing for diagnosis.

## Contribution

This is the second reported case of extrarenal PRCC-TFE3 fusion-related renal cell carcinoma, expanding the known clinical spectrum of this rare cancer subtype.

## Key findings

- PRCC-TFE3 fusion was confirmed via RNA sequencing in a tumor located outside the kidney.
- The tumor exhibited characteristic histological and immunohistochemical features of TFE3-RCC.
- The aggressive nature of extrarenal PRCC-TFE3 RCC necessitates close follow-up and advanced treatment options.

## Abstract

Transcription factor binding to IGHM enhancer 3 (TFE3) fusion-related renal cell carcinoma (TFE3-RCC) is a rare subtype of RCC. Its pathogenesis is primarily associated with chromosomal translocations resulting in TFE3 fusions. TFE3-RCC is most commonly observed in adolescents and young adults, with a higher incidence in women than in men. Typically, TFE3-RCC initially presents as painless hematuria, an abdominal mass, or with systemic symptoms. In recent years, with advancements in molecular diagnostic techniques, the diagnosis rate of TFE3-RCC has increased. However, extrarenal occurrences of TFE3-RCC remain rare. PRCC can fuse with TFE3 causing PRCC-TFE3 fusion-related RCC, a unique subtype of TFE3-RCC.

We report a case of PRCC-TFE3 RCC in a 29-year-old woman who was hospitalized owing to a mass in her upper abdomen. To our knowledge, this is the second reported instance of an extrarenal occurrence. Imaging revealed a large mass in the left retroperitoneum, and postoperative pathology revealed that the tumor cells were either epithelioid- or spindle-shaped, with large nuclei, prominent nucleoli, and abundant chromatin. The cells were densely arranged in nests or sheets, with abundant eosinophilic or amphophilic cytoplasm. Immunohistochemical analysis revealed diffuse and strong nuclear positivity for TFE3 but negativity for carbonic anhydrase IX (CAIX). Fluorescence in situ hybridization did not detect a TFE3 break, but RNA sequencing confirmed the presence of a PRCC-TFE3 fusion.

The diagnosis of TFE3-RCC requires a comprehensive evaluation of histological features, immunohistochemical markers, and molecular testing. PRCC-TFE3 RCC is highly aggressive with a high recurrence rate and poor prognosis in adults. Surgical resection is the primary treatment for localized lesions. However, close follow-up is necessary owing to a high risk of recurrence and metastasis. Targeted therapies and immunotherapies are potential treatment options for patients with advanced or metastatic disease.

## Linked entities

- **Genes:** TFE3 (transcription factor binding to IGHM enhancer 3) [NCBI Gene 7030], PRCC (proline rich mitotic checkpoint control factor) [NCBI Gene 5546]
- **Proteins:** CA9 (carbonic anhydrase 9)
- **Diseases:** renal cell carcinoma (MONDO:0005086)

## Full-text entities

- **Genes:** TFE3 (transcription factor binding to IGHM enhancer 3) [NCBI Gene 7030] {aka MRXSPF, RCCP2, RCCX1, TFEA, bHLHe33}, CA9 (carbonic anhydrase 9) [NCBI Gene 768] {aka CAIX, MN}, PRCC (proline rich mitotic checkpoint control factor) [NCBI Gene 5546] {aka RCCP1, TPRC}
- **Diseases:** metastasis (MESH:D009362), RCC (MESH:D002292), abdominal mass (MESH:D000007), tumor (MESH:D009369), hematuria (MESH:D006417)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

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## References

14 references — full list in the complete paper: https://tomesphere.com/paper/PMC12158674/full.md

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Source: https://tomesphere.com/paper/PMC12158674