# Molecular glue binding behavior of phosphoantigens to alpaca butyrophilins

**Authors:** Chang Liu, Simin Yi, Mengting Zhang, Chun-Chi Chen, Yingle Liu, Zhen Zhang, Rey-Ting Guo, Yunyun Yang

PMC · DOI: 10.1016/j.jbc.2025.108555 · 2025-04-26

## TL;DR

This study reveals how phosphoantigens bind to alpaca butyrophilins, providing insights into immune system activation and cross-species immune adaptation.

## Contribution

The discovery of DMASPP acting as a molecular glue in alpaca butyrophilin interactions is novel and expands understanding of immune recognition mechanisms.

## Key findings

- DMASPP functions as a molecular glue in the interaction between alpaca and human butyrophilin B30.2 domains.
- HMBPP-08 has stronger affinity to VpBTN3 B30.2 domain but does not promote heterologous VpBTNs interaction.
- The study establishes a theoretical framework for Vγ9Vδ2 T cell activation and cross-species immune adaptation.

## Abstract

Vγ9Vδ2 T cells that respond to phosphoantigen (pAg) function as crucial sentinels of the immune system to eradicate pathogen-infected cells and tumor cells. Alpaca (Vicugna pacos) is the first nonprimate species identified to possess the pAg-reactive Vγ9Vδ2 T cell subset. However, the molecular mechanism accounting for the pAg recognition of alpaca Vγ9Vδ2 T cells remains unclear. Here, we report the crystal structures of alpaca butyrophilin 3 (VpBTN3) B30.2 domain in complex with the exogenous pAg analog, HMBPP-08, which is a valuable tool for studying the mechanism of butyrophilin-dependent Vγ9Vδ2 T cell activation, and the endogenous pAg analogue, dimethylallyl (S)-thiolodiphosphate (DMASPP). We elucidated that the function of pAgs is governed by their structural differences. Notably, DMASPP acts as a molecular glue in the interaction between the intracellular B30.2 domains of heterologous butyrophilins in alpaca and human. Interestingly, although HMBPP-08 has stronger affinity than DMASPP to VpBTN3 B30.2 domain, HMBPP-08 did not promote heterologous VpBTNs interaction. These findings establish a novel theoretical framework elucidating the mechanisms of Vγ9Vδ2 T cell activation and demonstrate the conserved evolutionary mechanisms underlying cross-species immune adaptation.

## Linked entities

- **Proteins:** BBTN1 (butyrophilin 1, MHCB region)
- **Chemicals:** dimethylallyl (S)-thiolodiphosphate (PubChem CID 448399)
- **Species:** Vicugna pacos (taxon 30538), Homo sapiens (taxon 9606)

## Full-text entities

- **Diseases:** tumor (MESH:D009369)
- **Species:** Homo sapiens (human, species) [taxon 9606], Vicugna pacos (alpaca, species) [taxon 30538]

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12152872/full.md

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Source: https://tomesphere.com/paper/PMC12152872