# Decoding the Chemical Language of Ribosomally Synthesized and Post‐Translationally Modified Peptides from the Untapped Archaea Domain

**Authors:** Zhi‐Man Song, Cunlei Cai, Ying Gao, Xiaoqian Lin, Qian Yang, Dengwei Zhang, Gengfan Wu, Haoyu Liang, Qianlin Zhuo, Junliang Zhang, Peiyan Cai, Haibo Jiang, Wenhua Liu, Yong‐Xin Li

PMC · DOI: 10.1002/anie.202501074 · Angewandte Chemie (International Ed. in English) · 2025-04-14

## TL;DR

This paper explores new chemical compounds from archaea, revealing their role in microbial interactions and environmental adaptation.

## Contribution

The study pioneers the use of heterologous expression to uncover novel lanthipeptides and their ecological roles in archaea.

## Key findings

- Identification of 24 lanthipeptides, including a unique type with diamino-dicarboxylic termini.
- Archaeal lanthipeptides show antagonistic activity against haloarchaea and enhance host motility.
- Lanthipeptides upregulate archaellin gene expression, aiding archaeal interaction with abiotic environments.

## Abstract

Chemical communication is crucial in ecosystems with complex microbial communities. However, the difficulties inherent to the cultivation of archaea have led to a limited understanding of their chemical language, especially regarding the structure diversity and function of secondary metabolites (SMs). Our in‐depth exploration into the biosynthetic potential of archaea has unveiled the previously unexplored biosynthetic capabilities and chemical diversity of archaeal ribosomally synthesized and post‐translationally modified peptides (RiPPs). Through the first application of heterologous expression in archaeal SM discovery, we have identified 24 lanthipeptides, including a distinctive type featuring diamino‐dicarboxylic termini. It highlights the uniqueness of archaeal biosynthetic pathways and significantly expands the chemical landscape of archaeal SMs. Additionally, archaeal lanthipeptides demonstrate antagonistic activity against haloarchaea, mediating the unique biotic interaction in the halophilic niche. They showcase a new ecological role of RiPPs in enhancing the host's motility by inducing the rod‐shaped cell morphology and upregulating the archaellin gene expression, facilitating the archaeal interaction with abiotic environments. These discoveries broaden our understanding of archaeal chemical language and provide promising prospects for future exploration of SM‐mediated interaction.

Secondary metabolites (SMs) are essential across all life domains, yet those originating from the Archaea domain remain poorly understood. Here, the systematic genome mining and the pioneering heterologous expression of archaeal SMs have revealed the chemical landscape of archaeal lanthipeptides, showing both canonical and non‐canonical forms. These lanthipeptides exhibit antagonistic activity and activate the host's motility, likely shaping the archaeal community and mediating environmental adaptation.

## Full-text entities

- **Chemicals:** Peptides (MESH:D010455), RiPPs (-)

## Full text

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## Figures

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## References

52 references — full list in the complete paper: https://tomesphere.com/paper/PMC12144867/full.md

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Source: https://tomesphere.com/paper/PMC12144867