# Screening and validation of 3’-Methoxydaidzein as a therapeutic agent in ulcerative colitis based on disulfidptosis-associated molecular clusters

**Authors:** Jie Yuan, Chongyong Gao, Wang Xin, Fanlin Meng, Hong Zhang

PMC · DOI: 10.1371/journal.pone.0324586 · PLOS One · 2025-06-06

## TL;DR

This study identifies a new potential treatment for ulcerative colitis using a compound called 3’-Methoxydaidzein that targets disulfidptosis-related genes.

## Contribution

The study introduces 3’-Methoxydaidzein as a novel therapeutic agent for UC based on disulfidptosis-associated molecular clusters.

## Key findings

- Two disulfidptosis-related gene clusters were identified with distinct gene and immune profiles in UC patients.
- 3’-Methoxydaidzein reduced inflammation in Caco2 cells and colonic injury in UC mice by upregulating SLC26A2.
- SLC26A2 is a significant hub gene in UC and may serve as a therapeutic target.

## Abstract

Ulcerative colitis (UC) is a recurrent inflammatory condition of the bowel with a multifaceted pathogenesis, including programmed cell death, oxidative stress, and immune-mediated inflammation. As a recently identified type of cell death, disulfidptosis has an unclear role in UC.

We analyzed clusters of disulfidptosis-related genes (DRGs) and immune cell infiltration in 361 patients with UC from the GSE73661and GSE92415 datasets. Differentially expressed genes (DEGs) were identified using unsupervised clustering methods, and hub genes were selected using machine learning algorithms. Additionally, potential key components of potential traditional Chinese medicines for the treatment of UC were predicted based on hub genes. Finally, experimental validation was performed through qRT-PCR, western blotting, and immunohistochemistry.

We identified two molecular clusters related to disulfidptosis, each showing significant heterogeneity in gene expression and immune profiles. Hub genes associated with disulfidptosis, CXCL1, HMGCS2, AQP8, and SLC26A2, were further screened and validated. Additionally, potential traditional Chinese medicines for UC were predicted. 3’-Methoxydaidzein (MHD), a key constituent of Puerariae Radix, inhibited LPS-induced inflammatory responses in Caco2 cells and alleviated DSS-induced colonic injury in UC mice via upregulation of SLC26A2.

DRGs demonstrate strong discriminatory power in distinguishing UC subtypes. Cluster with high expression of SLC26A2 showed a UC phenotype with a milder degree of damage. Additionally, we identified the hub gene SLC26A2 as playing a significant role in UC, and MHD demonstrates potential as a targeted therapeutic strategy for UC.

## Linked entities

- **Genes:** CXCL1 (C-X-C motif chemokine ligand 1) [NCBI Gene 2919], HMGCS2 (3-hydroxy-3-methylglutaryl-CoA synthase 2) [NCBI Gene 3158], AQP8 (aquaporin 8) [NCBI Gene 343], SLC26A2 (solute carrier family 26 member 2) [NCBI Gene 1836]
- **Chemicals:** 3’-Methoxydaidzein (PubChem CID 5319422)
- **Diseases:** ulcerative colitis (MONDO:0005101)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** CXCL1 (C-X-C motif chemokine ligand 1) [NCBI Gene 2919] {aka FSP, GRO1, GROa, MGSA, MGSA-a, NAP-3}, SLC26A2 (solute carrier family 26 member 2) [NCBI Gene 1836] {aka D5S1708, DTD, DTDST, EDM4, MST153, MSTP157}, AQP8 (aquaporin 8) [NCBI Gene 343] {aka AQP-8}, HMGCS2 (3-hydroxy-3-methylglutaryl-CoA synthase 2) [NCBI Gene 3158]
- **Diseases:** Ulcerative colitis (MESH:D003093), inflammation (MESH:D007249), colonic injury (MESH:D003108)
- **Chemicals:** 3'-Methoxydaidzein (-), LPS (MESH:D008070)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** Caco2 — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_0025)

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12143574/full.md

## References

54 references — full list in the complete paper: https://tomesphere.com/paper/PMC12143574/full.md

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Source: https://tomesphere.com/paper/PMC12143574