# Immune-related gene risk model establishment and role of key gene FUCA1 in malignant pleural mesothelioma

**Authors:** Lin Shi, Dongqi Yuan, Fuyi Zhu, Yuchao He, Ran Zuo, Liwei Chen, Yi Luo, Yu Wang, Dingzhi Huang, Peng Chen, Hua Guo

PMC · DOI: 10.3389/fphar.2025.1577232 · Frontiers in Pharmacology · 2025-05-23

## TL;DR

This study develops an immune-related gene risk model for malignant pleural mesothelioma and identifies the key gene FUCA1 as a potential biomarker and therapeutic target.

## Contribution

The study introduces an eight-gene risk score model and identifies FUCA1 as a novel prognostic biomarker for mesothelioma.

## Key findings

- The high-risk group based on the model has worse survival and lower immunotherapy sensitivity.
- FUCA1 is an independent risk factor for MPM prognosis and inhibits cancer cell proliferation and migration.
- FUCA1 suppresses epithelial–mesenchymal transition via the PI3K-AKT signaling pathway.

## Abstract

Malignant pleural mesothelioma (MPM) is a rare type of tumor closely associated with asbestos exposure. Increasing evidence shows that high immuno-heterogeneity reduces the therapeutic efficacy of MPM. At present, good biomarkers to screen immunodominant populations and predict the efficacy of immunotherapy are lacking.

In this study, expression data from TCGA, GSE2459, GSE51024, and GSE29354 were integrated for model construction. An eight-gene risk score model (FLI1, IL32, FUCA1, CCR2, PSMB10, CCL5, WT1, and KRT5) was constructed using CIBERSORT, weighted gene co-expression network analysis, Cox regression analysis, differentially expressed gene analysis, and protein–protein interaction network. The K–M survival analysis was used to evaluate the prediction ability of the risk score model. The TIDE database and Oncology Drug Sensitivity Genomics database were used to assess the predictive power of risk score models for treatment. In addition, the expression of the key gene in para-carcinoma tissue and MPM samples were detected by Immunohistochemistry. Patient clinical information was employed to evaluate the relationship between key genes and patient survival. Finally, the biological functions of the key gene were examined by in vitro and in vivo experiments.

The score model was used to divide patients with MPM into low- and high-risk groups. The high-risk group was characterized by a survival disadvantage, and they were less sensitive to immunotherapy. Clinical data suggest that FUCA1, which is a key gene in the model, is an independent risk factor for predicting the prognosis of patients with MPM. A series of experiments demonstrated that FUCA1 expression was negatively correlated with the proliferation, invasion and migration abilities of MPM cells. Further studies revealed that FUCA1 inhibited epithelial–mesenchymal transition in MPM cells by regulating the PI3K-AKT signaling pathway.

The risk score model provides a new perspective for screening potential populations to benefit from immunotherapy and predicting their survival. FUCA1 may be a potential prognostic biomarker and promising therapeutic target for patients with MPM.

## Linked entities

- **Genes:** FLI1 (Fli-1 proto-oncogene, ETS transcription factor) [NCBI Gene 2313], IL32 (interleukin 32) [NCBI Gene 9235], FUCA1 (alpha-L-fucosidase 1) [NCBI Gene 2517], CCR2 (C-C motif chemokine receptor 2) [NCBI Gene 729230], PSMB10 (proteasome 20S subunit beta 10) [NCBI Gene 5699], CCL5 (C-C motif chemokine ligand 5) [NCBI Gene 6352], WT1 (WT1 transcription factor) [NCBI Gene 7490], KRT5 (keratin 5) [NCBI Gene 3852]
- **Diseases:** Malignant pleural mesothelioma (MONDO:0005112)

## Full-text entities

- **Genes:** FLI1 (Fli-1 proto-oncogene, ETS transcription factor) [NCBI Gene 2313] {aka BDPLT21, EWSR2, FLI-1, SIC-1}, IL32 (interleukin 32) [NCBI Gene 9235] {aka IL-32alpha, IL-32beta, IL-32delta, IL-32gamma, NK4, TAIF}, KRT5 (keratin 5) [NCBI Gene 3852] {aka CK5, DDD, DDD1, EBS1, EBS2, EBS2A}, FUCA1 (alpha-L-fucosidase 1) [NCBI Gene 2517] {aka FUCA}, WT1 (WT1 transcription factor) [NCBI Gene 7490] {aka AWT1, GUD, NPHS4, WAGR, WIT-2, WT-1}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, CCL5 (C-C motif chemokine ligand 5) [NCBI Gene 6352] {aka D17S136E, RANTES, SCYA5, SIS-delta, SISd, TCP228}, CCR2 (C-C motif chemokine receptor 2) [NCBI Gene 729230] {aka CC-CKR-2, CCR-2, CCR2A, CCR2B, CD192, CKR2}, PSMB10 (proteasome 20S subunit beta 10) [NCBI Gene 5699] {aka IMD121, LMP10, MECL1, PRAAS5, beta2i}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}
- **Diseases:** carcinoma (MESH:D009369), MPM (MESH:D000086002)
- **Chemicals:** asbestos (MESH:D001194)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12141270/full.md

## References

39 references — full list in the complete paper: https://tomesphere.com/paper/PMC12141270/full.md

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Source: https://tomesphere.com/paper/PMC12141270