# Case Report: Hereditary spastic paraplegia associated with monoallelic variant in the motor domain of KIF1A

**Authors:** Kathryn Sine, David Brodie-Mends, Wafae Chouhani, Lauren Massingham, Saud Alhusaini

PMC · DOI: 10.3389/fnhum.2025.1568511 · Frontiers in Human Neuroscience · 2025-05-19

## TL;DR

A father and son with similar neurological symptoms were found to have a genetic variant in the KIF1A gene, causing hereditary spastic paraplegia.

## Contribution

Reports a novel monoallelic variant in KIF1A associated with autosomal dominant hereditary spastic paraplegia.

## Key findings

- A heterozygous variant in KIF1A (p.Arg316Gln) was identified in a father and son with spastic paraplegia.
- The variant is likely pathogenic and associated with a slowly progressive HSP phenotype.
- The findings expand the genetic spectrum of KIF1A-related neurological disorders.

## Abstract

To investigate the genetic etiology of a familial case with spastic paraplegia.

Neurological examination, clinical and genetic work-up, including exome sequencing (ES), followed by targeted testing, were performed to determine the underlying etiology of the patients’ phenotype.

A 45-year-old man was initially diagnosed with spastic diplegic cerebral palsy in early childhood. He underwent multiple orthopedic interventions for lower extremities spasticity and progressive gait disturbance. His son developed similar neurological symptoms at 2-years of age. Despite unremarkable initial work-up, their relatively similar slowly progressive phenotype was suggestive of hereditary spastic paraplegia (HSP). ES was performed for the son at age 11 years, followed by cascade single testing for the father, which revealed a heterozygous (monoallelic) likely pathogenic variant [NM_001244008.2: c.947G > A (p.Arg316Gln); chr2-240775862] in exon 10 of the KIF1A gene.

KIF1A codes for a kinesin-3 motor protein involved in neuronal axon vesicular transport. KIF1A pathogenic variants are associated with several neurological phenotypes, most commonly HSP. The rare likely pathogenic variant (p.Arg316Gln) reported here was associated with an autosomal dominant HSP with few complications.

## Linked entities

- **Genes:** KIF1A (kinesin family member 1A) [NCBI Gene 547]
- **Diseases:** spastic paraplegia (MONDO:0019064), hereditary spastic paraplegia (MONDO:0019064)

## Full-text entities

- **Genes:** KIF1A (kinesin family member 1A) [NCBI Gene 547] {aka ATSV, C2orf20, HSN2C, MRD9, NESCAVS, SPG30}
- **Diseases:** spastic paraplegia (MESH:D010264), spasticity (MESH:D009128), HSP (MESH:D015419), gait disturbance (MESH:D020233), spastic diplegic cerebral palsy (MESH:C537945)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** c.947G > A

## Full text

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## Figures

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## References

22 references — full list in the complete paper: https://tomesphere.com/paper/PMC12127382/full.md

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Source: https://tomesphere.com/paper/PMC12127382