# A 15-year experience highlighting the spectrum of Alport kidney disease in the pediatric population and novel genetic variants in COL4A3–5

**Authors:** Nastja Andrejašič, Anja Blejc Novak, Mirjam Močnik, Nataša Marčun Varda, Špela Stangler Herodež, Danijela Krgović, Andrej Zupan, Anamarija Meglič

PMC · DOI: 10.1007/s00467-025-06683-8 · Pediatric Nephrology (Berlin, Germany) · 2025-02-05

## TL;DR

This study examines Alport kidney disease in children over 15 years, identifying new genetic variants and highlighting the importance of early diagnosis for better outcomes.

## Contribution

The study reports eight novel genetic variants in COL4A3–5 and expands the clinical spectrum of pediatric Alport kidney disease.

## Key findings

- 85 pediatric patients with pathogenic COL4A3–5 variants were identified over 15 years.
- Novel variants were found in COL4A3, COL4A4, and COL4A5, with X-linked and autosomal inheritance patterns.
- Early diagnosis and genetic confirmation are critical for managing disease progression in children.

## Abstract

Alport kidney disease (AKD) presents one of the most prevalent genetic kidney disorders, characterized by a complex genetic background and diverse clinical manifestations. This study aimed to review the clinical and genetic features of pediatric patients with COL4A3–5 variants and identify novel genetic variants.

Data were collected retrospectively at a national level from pediatric patients up to 19 years old, who underwent genetic testing between 2008 and 2023. Patients with pathogenic and likely pathogenic COL4A3–5 variants were included. Their clinical, laboratory, and genetic characteristics were presented.

Over 15 years, 85 children and adolescents tested positive for pathogenic or likely pathogenic COL4A3–5 variants. Increasing incidence was noted as genetic testing became more prevalent. One patient (1.2%) progressed to kidney failure and six (7%) had extrarenal involvement. Pathogenic or likely pathogenic variants in COL4A3, COL4A4, and COL4A5 genes were found in 14 (16.4%), 34 (40.0%), and 37 (43.6%) patients, respectively. Patients were diagnosed with autosomal, X-linked, and digenic AKD in 55.2%, 43.6%, and 1.2%, respectively. Eight novel variants were recorded, and their associated phenotype presented.

This study expands the genetic and clinical background of pediatric patients with AKD, presenting on a spectrum from mild hematuria to progressive chronic kidney disease. Genetic confirmation and risk stratification in the pediatric population are critical to ensure timely care and potentially slow down the progression of kidney disease.

A higher resolution version of the Graphical abstract is available as Supplementary information

A higher resolution version of the Graphical abstract is available as Supplementary information

The online version contains supplementary material available at 10.1007/s00467-025-06683-8.

## Linked entities

- **Genes:** COL4A3 (collagen type IV alpha 3 chain) [NCBI Gene 1285], COL4A4 (collagen type IV alpha 4 chain) [NCBI Gene 1286], COL4A5 (collagen type IV alpha 5 chain) [NCBI Gene 1287]
- **Diseases:** chronic kidney disease (MONDO:0005300), kidney failure (MONDO:0001106)

## Full-text entities

- **Genes:** COL4A3 (collagen type IV alpha 3 chain) [NCBI Gene 1285] {aka ATS2, ATS3, ATS3A, ATS3B, BFH2}, COL4A5 (collagen type IV alpha 5 chain) [NCBI Gene 1287] {aka ASLN, ATS, ATS1, CA54}, COL4A4 (collagen type IV alpha 4 chain) [NCBI Gene 1286] {aka ATS2, BFH, BFH1, CA44}
- **Diseases:** kidney failure (MESH:D051437), genetic kidney disorders (MESH:D007680), chronic kidney disease (MESH:D051436), hematuria (MESH:D006417), AKD (MESH:D007674)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12116809/full.md

## References

6 references — full list in the complete paper: https://tomesphere.com/paper/PMC12116809/full.md

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Source: https://tomesphere.com/paper/PMC12116809