# Timing Is Everything: The Metabolic Partitioning of Suberin-Destined Carbon

**Authors:** Jessica L. Sinka, Mark A. Bernards

PMC · DOI: 10.3390/plants14101433 · Plants · 2025-05-10

## TL;DR

This study shows how carbon is allocated to different suberin components during wound healing in potato tubers, revealing a shift from phenolic to aliphatic metabolism over time.

## Contribution

The study provides new insights into the temporal dynamics of carbon partitioning between phenolic and aliphatic suberin monomer biosynthesis.

## Key findings

- Early wound healing prioritizes carbon allocation to phenolic metabolites.
- Later stages show shared carbon use between phenolic and aliphatic metabolites.
- Labelled carbon incorporation into aliphatic monomers increases over time.

## Abstract

Suberin is a cell wall-associated biopolymer that possesses both poly(phenolic) and poly(aliphatic) elements assembled into chemically and spatially distinct domains. Domain-specific monomers are formed via a branched pathway between phenolic and aliphatic metabolisms. Previous transcript accumulation data (RNAseq) from early stages of wound-induced suberization revealed highly coordinated, temporal changes in the regulation of these two branches. Notably, phenolic metabolism-associated transcripts accumulated first, indicating a preference toward phenolic production early on post-wounding. To better understand the dynamics of suberin monomer biosynthesis and assembly, we assessed carbon allocation between phenolic and aliphatic metabolisms during wound-induced suberization. To do so, [13C6]-glucose was administered to wound-healing potato tuber discs at different times post-wounding, and patterns of heavy carbon incorporation into (1) primary metabolites and (2) the suberin polymer were assessed. During early stages of wound-healing, carbon from glucose was rapidly incorporated into phenolic-destined metabolites, while at later stages it was shared between phenolic- and aliphatic-destined metabolites. Similarly, the pattern of labelled carbon incorporation into the poly(aliphatic) domain reflected a greater dedication of carbon towards 18:1 w-hydroxy fatty acid and 18:1 dioic acid (the two most abundant aliphatic monomers in potato suberin) later in the wound healing time course.

## Linked entities

- **Species:** Solanum tuberosum (taxon 4113)

## Full-text entities

- **Chemicals:** 18:1 dioic acid (-), glucose (MESH:D005947), carbon (MESH:D002244), Suberin (MESH:C065875)
- **Species:** Solanum tuberosum (potatoes, species) [taxon 4113]

## Full text

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## Figures

11 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12114950/full.md

## References

52 references — full list in the complete paper: https://tomesphere.com/paper/PMC12114950/full.md

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Source: https://tomesphere.com/paper/PMC12114950