# High-Risk Neuroblastoma Stage 4 (NBS4): Developing a Medicinal Chemistry Multi-Target Drug Approach

**Authors:** Amgad Gerges, Una Canning

PMC · DOI: 10.3390/molecules30102211 · Molecules · 2025-05-19

## TL;DR

This paper explores a new approach to treating high-risk stage 4 neuroblastoma in children by identifying multi-target drug candidates that could inhibit key disease-related proteins.

## Contribution

The novelty lies in identifying potential multi-target inhibitors for four key proteins in high-risk neuroblastoma using computational drug design methods.

## Key findings

- Eight compounds were identified as potential inhibitors for four neuroblastoma-related targets using computational methods.
- The four targets (BRD, HDAC, HH, TRK) share high amino acid similarity in their binding sites, suggesting multi-target drug potential.
- Two additional targets (RA and c-Src) showed lower binding site similarity compared to the primary four.

## Abstract

Childhood neuroblastoma (NB) is a malignant tumour that is a member of a class of embryonic tumours that have their origins in sympathoadrenal progenitor cells. There are five stages in the clinical NB staging system: 1, 2A, 2B, 3, 4S, and 4. For those diagnosed with stage 4 neuroblastoma (NBS4), the treatment options are limited with a survival rate of between 40 and 50%. Since 1975, more than 15 targets have been identified in the search for a treatment for high-risk NBS4. This article is concerned with the search for a multi-target drug treatment for high-risk NBS4 and focuses on four possible treatment targets that research has identified as having a role in the development of NBS4 and includes the inhibitors Histone Deacetylase (HDAC), Bromodomain (BRD), Hedgehog (HH), and Tropomyosin Kinase (TRK). Computer-aided drug design and molecular modelling have greatly assisted drug discovery in medicinal chemistry. Computational methods such as molecular docking, homology modelling, molecular dynamics, and quantitative structure–activity relationships (QSAR) are frequently used as part of the process for finding new therapeutic drug targets. Relying on these techniques, the authors describe a medicinal chemistry strategy that successfully identified eight compounds (inhibitors) that were thought to be potential inhibitors for each of the four targets listed above. Results revealed that all four targets BRD, HDAC, HH and TRK receptors binding sites share similar amino acid sequencing that ranges from 80 to 100%, offering the possibility of further testing for multi-target drug use. Two additional targets were also tested as part of this work, Retinoic Acid (RA) and c-Src (Csk), which showed similarity (of the binding pocket) across their receptors of 80–100% but lower than 80% for the other four targets. The work for these two targets is the subject of a paper currently in progress.

## Linked entities

- **Proteins:** HDT4 (histone deacetylase-related / HD-like protein), shh.L (sonic hedgehog L homeolog), SRC (SRC proto-oncogene, non-receptor tyrosine kinase)
- **Diseases:** neuroblastoma (MONDO:0005072)

## Full-text entities

- **Genes:** SRC (SRC proto-oncogene, non-receptor tyrosine kinase) [NCBI Gene 6714] {aka ASV, SRC1, THC6, c-SRC, p60-Src}, HDAC9 (histone deacetylase 9) [NCBI Gene 9734] {aka HD7, HD7b, HD9, HDAC, HDAC7B, HDAC9B}, CSK (C-terminal Src kinase) [NCBI Gene 1445], NTRK1 (neurotrophic receptor tyrosine kinase 1) [NCBI Gene 4914] {aka MTC, TRK, TRK1, TRKA, Trk-A, p140-TrkA}
- **Diseases:** malignant tumour (MESH:D009369), Childhood neuroblastoma (MESH:D009447), embryonic tumours (MESH:D009373)
- **Chemicals:** RA (MESH:D014212), BRD (-)

## Full text

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## Figures

30 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12114419/full.md

## References

52 references — full list in the complete paper: https://tomesphere.com/paper/PMC12114419/full.md

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Source: https://tomesphere.com/paper/PMC12114419