# Genome-Wide Identification and Phylogenetic Characterization of the FTIP Gene Family in Maize (Zea mays)

**Authors:** Guihua Lv, Fangjian Li, Jianjian Chen, Zhenxing Wu, Tingzhen Wang, Haiping Ding, Zhiming Zhang, Fazhan Qiu

PMC · DOI: 10.3390/genes16050539 · Genes · 2025-04-30

## TL;DR

This study identifies and analyzes the FTIP gene family in maize, revealing their roles in stress responses and evolution.

## Contribution

The paper provides a comprehensive phylogenetic and functional characterization of the ZmFTIP gene family in maize.

## Key findings

- 27 ZmFTIP genes were identified and grouped into five evolutionary clades.
- ZmFTIP18 and ZmFTIP25 are upregulated under cadmium stress, while ZmFTIP13 is downregulated.
- Promoter analysis revealed hormone and stress-related regulatory motifs in ZmFTIP genes.

## Abstract

The maize FT-interacting protein (FTIP) gene family represents a group of multiple C2 domain and transmembrane proteins (MCTPs), characterized by their unique structural motifs and membrane-spanning regions., plays crucial roles in intercellular communication and stress responses. Here, we systematically characterized 27 ZmFTIP genes unevenly distributed across 10 maize chromosomes. Phylogenetic analysis with rice, soybean, and Arabidopsis homologs revealed five evolutionary clades with monocot-specific conservation patterns. Promoter cis-element profiling identified hormone-responsive (ABA, JA, auxin) and stress-related motifs, corroborated by differential expression under abiotic stresses and phytohormone treatments. Notably, ZmFTIP18 and ZmFTIP25 showed sustained upregulation under cadmium exposure, while ZmFTIP13 exhibited downregulation. Synteny analysis demonstrated strong conservation with monocot FTIPs, suggesting ancient evolutionary origins. This comprehensive study provides foundational insights into ZmFTIP functional diversification and potential biotechnological applications.

## Linked entities

- **Chemicals:** cadmium (PubChem CID 23973), ABA (PubChem CID 287291), JA (PubChem CID 139204585), auxin (PubChem CID 92772)
- **Species:** Zea mays (taxon 4577), Oryza sativa (taxon 4530), Glycine max (taxon 3847), Arabidopsis thaliana (taxon 3702), Mus musculus (taxon 10090)

## Full-text entities

- **Chemicals:** JA (-), ABA (MESH:D000040), cadmium (MESH:D002104), auxin (MESH:D007210)
- **Species:** Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Glycine max (soybean, species) [taxon 3847], Zea mays (maize, species) [taxon 4577], Oryza sativa (Asian cultivated rice, species) [taxon 4530]

## Full text

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## Figures

10 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12111101/full.md

## References

43 references — full list in the complete paper: https://tomesphere.com/paper/PMC12111101/full.md

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Source: https://tomesphere.com/paper/PMC12111101