# Genome-Wide Identification and Functional Prediction of LRR-RLK Family Genes in Foxtail Millet (Setaria italica) in Response to Stress

**Authors:** Zhijiang Li, Xinmiao Kang, Miaomiao Song, Xiaojie Dong, Jinfeng Ma, Jinhai Yu, Xiangyu Li, Yalu Zheng, Guangquan Sun, Xianmin Diao, Xiaotong Liu

PMC · DOI: 10.3390/ijms26104576 · International Journal of Molecular Sciences · 2025-05-10

## TL;DR

This paper identifies and analyzes LRR-RLK genes in foxtail millet to understand their role in stress responses like drought and disease.

## Contribution

The study provides a comprehensive phylogenetic and functional analysis of LRR-RLK genes in foxtail millet under stress conditions.

## Key findings

- 285 SiLRR-RLK genes were identified and grouped into 12 subfamilies.
- SiLRR-RLK genes show uneven chromosomal distribution with gene clusters.
- Expression patterns suggest roles in drought, salinity, and pathogen stress responses.

## Abstract

Leucine-rich repeat receptor-like kinases (LRR-RLKs) are involved in the regulation of various biological processes, including plant growth, development, and responses to biotic and abiotic stresses. Foxtail millet (Setaria italica), an important cereal crop, has been extensively studied for its stress tolerance mechanisms. In this study, we performed a comprehensive phylogenetic analysis and chromosomal mapping of LRR-RLK genes in Setaria italica. A total of 285 SiLRR-RLK genes were identified and classified into 12 subfamilies based on phylogenetic relationships. Chromosome localization analysis revealed that SiLRR-RLK genes are unevenly distributed across the chromosomes, with certain regions showing gene clusters. Functional analysis of these genes under biotic and abiotic stress conditions suggested that several SiLRR-RLK family members are involved in key stress response pathways. Expression profiling indicated differential expression patterns of SiLRR-RLK genes in response to various stresses, including drought, salinity, and pathogen infection, highlighting their potential roles in stress adaptation. In conclusion, the phylogenetic and functional analysis of the SiLRR-RLK gene family in Setaria italica provides valuable insights into their roles in stress responses and lays the groundwork for future studies aimed at enhancing stress tolerance in foxtail millet.

## Linked entities

- **Species:** Setaria italica (taxon 4555)

## Full-text entities

- **Species:** Setaria italica (foxtail millet, species) [taxon 4555]

## Full text

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## Figures

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## References

79 references — full list in the complete paper: https://tomesphere.com/paper/PMC12111010/full.md

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Source: https://tomesphere.com/paper/PMC12111010