# Synthetic antibodies targeting EphA2 induce diverse signaling‐competent clusters with differential activation

**Authors:** Jarrett J. Adams, Heather A. Bruce, Suryasree Subramania, Lynda Ploder, Julia Garcia, Isabelle Pot, Levi L. Blazer, Alexander U. Singer, Sachdev S. Sidhu

PMC · DOI: 10.1002/pro.70145 · Protein Science : A Publication of the Protein Society · 2025-05-24

## TL;DR

This paper explores how synthetic antibodies can target the EphA2 receptor to form different signaling clusters, offering new insights for cancer therapy.

## Contribution

The study introduces synthetic antibodies that target distinct EphA2 domains and reveals how they form diverse signaling clusters.

## Key findings

- Three synthetic antibodies were developed targeting different EphA2 domains.
- Structural modeling showed competitive and non-competitive inhibition mechanisms of EphA2 signaling.
- Bivalent IgGs induce multiple signaling-competent clusters with varying kinase recruitment efficiencies.

## Abstract

The receptor tyrosine kinase EphA2 interacts with ephrin (Efn) ligands to mediate bi‐directional signals that drive cellular sorting processes during tissue development. In the context of various cancers, EphA2 can also drive invasive metastatic disease and represents an important target for cancer therapeutics. Natural Efn ligands sterically seed intertwined EphA2 clusters capable of recruiting intracellular kinases to mediate trans‐phosphorylation. Synthetic proteins, such as antibodies (Abs), can mimic Efn ligands to trigger EphA2 signaling, leading to receptor internalization and degradation, and enabling intracellular delivery of conjugated drugs. Furthermore, Abs are capable of recruiting EphA2 into clusters distinct from those seeded by Efn. We developed three synthetic Abs targeting distinct EphA2 domains and determined the paratope valency necessary for agonist or antagonist properties of each of the three epitopes. Structural modeling of monovalent Fabs in complex with EphA2 elucidated competitive and non‐competitive mechanisms of inhibition of EphA2 canonical signaling. Likewise, modeling of clusters induced by bivalent IgGs elucidated multiple signaling‐competent EphA2 clusters capable of triggering a continuum of signaling strengths and provided insights into the requirement for multimerization of EphA2 to trigger phosphorylation. Our study shows how different agonist clusters lead to distinct kinase recruitment efficiencies to modify phosphotyrosine signal strength, and provides a panel of anti‐EphA2 Abs as reagents for the development of therapeutics.

## Linked entities

- **Genes:** EPHA2 (EPH receptor A2) [NCBI Gene 1969]
- **Proteins:** EPHA2 (EPH receptor A2), Ephrin (ephrin)
- **Diseases:** cancer (MONDO:0004992), metastatic disease (MONDO:0024883)

## Full-text entities

- **Genes:** EPHA2 (EPH receptor A2) [NCBI Gene 1969] {aka ARCC2, CTPA, CTPP1, CTRCT6, ECK}
- **Diseases:** cancer (MESH:D009369)
- **Chemicals:** phosphotyrosine (MESH:D019000)

## Full text

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## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12102760/full.md

## References

64 references — full list in the complete paper: https://tomesphere.com/paper/PMC12102760/full.md

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Source: https://tomesphere.com/paper/PMC12102760