# Specific nucleotide substitutions in the burst sequence enhance polyhedrin expression in alphabaculoviruses: improvement of baculovirus expression vectors

**Authors:** Susumu Katsuma, Koshi Fukaura, Noriko Matsuda-Imai

PMC · DOI: 10.1128/aem.00144-25 · 2025-04-07

## TL;DR

Researchers found that specific DNA changes in a virus's genetic sequence can significantly boost protein production in baculovirus systems used for making vaccines and medicines.

## Contribution

The study identifies specific nucleotide substitutions in the burst sequence that enhance polyhedrin expression in baculoviruses.

## Key findings

- Triple TTT mutations at positions −16 to −14 in the polh upstream region increased reporter expression four- to fivefold.
- The enhancement was observed in both Bombyx mori and Autographa californica baculovirus systems.
- The mutations increased polh mRNA and POLH protein accumulation in OB-producing viruses.

## Abstract

Alphabaculoviruses produce a large number of occlusion bodies (OBs) in host cells during the late stage of infection. OBs are mainly composed of the viral product polyhedrin (POLH), and the extremely high-level transcription of the polh gene has been exploited to express foreign proteins in insect cultured cells, larvae, and pupae. This polh hyper-transcription requires the “burst sequence” located between the transcriptional start site and the initiation codon. Here, we focused on the roles of the A-rich region within the burst sequence. We generated Bombyx mori nucleopolyhedrovirus mutants whose burst sequence contained “A-to-T” mutations in the A-rich region. Some mutants exhibited levels of polh promoter-driven reporter expression lower than or comparable to that of the wild type, whereas the mutants with TTT mutations at positions −16 to −14 in the polh upstream region showed a four- to fivefold increase in it. Most cases of single or double A-to-T mutations at –16 to –14 of the upstream region had small but significant effects on the expression level, while the triple mutation was the most effective. This enhancement was also observed in the Autographa californica multiple nucleopolyhedrovirus-based vector system, which is more commonly used for foreign protein expression. We also found that this triple mutation enhanced the accumulation of polh mRNA and POLH protein even in an OB-producing virus. These results indicate that specific mutations in the burst sequence have the potential to increase baculoviral protein expression at the transcriptional level and may improve foreign protein expression by baculoviruses.

The most notable characteristic of alphabaculoviruses is that they produce many proteinaceous occlusion bodies (OBs) during the very late stages of infection. The main component of these OBs is virus-encoded polyhedrin (POLH). The high expression of the polh gene led to the development of the baculovirus expression vector system (BEVS). Currently, this system is widely used for the production of vaccines, veterinary medicines, and reagents. Despite this background, the mechanisms by which baculoviruses ultimately produce large quantities of OBs remain largely unexplained, even after approximately 40 years since the BEVS development. Here, we discovered that three nucleotide substitutions in the polh burst sequence markedly increased the polh expression levels in both BmNPV- and AcMNPV-based BEVSs, regardless of the vector type. This discovery can be easily introduced into the currently used BEVS, possibly contributing to further improvements for achieving even higher expression of foreign proteins.

## Linked entities

- **Genes:** POLH (DNA polymerase eta) [NCBI Gene 5429]
- **Proteins:** polyhedrin (polyhedrin), POLH (DNA polymerase eta)
- **Species:** Bombyx mori (taxon 7091), Autographa californica (taxon 572729)

## Full-text entities

- **Genes:** POLH [NCBI Gene 1724487]
- **Diseases:** infection (MESH:D007239)
- **Species:** Autographa californica nucleopolyhedrovirus (no rank) [taxon 46015], Bombyx mori nucleopolyhedrovirus (no rank) [taxon 271108], Autographa californica multiple nucleopolyhedrovirus (no rank) [taxon 307456], Bombyx mori (domestic silkworm, species) [taxon 7091]
- **Mutations:** TTT mutations at positions -16

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12093959/full.md

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Source: https://tomesphere.com/paper/PMC12093959