# The complete chloroplast genome and phylogenetic analysis of Cyananthus macrocalyx Franch. 1887 Campanulaceae

**Authors:** Hai-Tao Ma, Dan Lei, Qi-Yin Chen, Bei Jiang, Yong-Zeng Zhang

PMC · DOI: 10.1080/23802359.2025.2503403 · Mitochondrial DNA. Part B, Resources · 2025-05-11

## TL;DR

This study sequenced the chloroplast genome of Cyananthus macrocalyx and analyzed its phylogenetic position within the Campanulaceae family.

## Contribution

The paper presents the complete chloroplast genome and phylogenetic analysis of Cyananthus macrocalyx for the first time.

## Key findings

- The chloroplast genome of C. macrocalyx is 167,964 bp long with a GC content of 37.95%.
- Phylogenetic analysis shows C. macrocalyx is closely related to C. flavus.
- The genome contains 112 genes, including 78 protein-coding genes and 54 SSRs, mostly A/T monomers.

## Abstract

Cyananthus macrocalyx Franch. belongs to the genus Cyananthus in the family Campanulaceae. In this study, we sequenced and analyzed its chloroplast genome then constructed a phylogenetic tree to determine its phylogenetic position. The results show: the total length of the chloroplast genome of C. macrocalyx was 167,964 bp, with a GC content of 37.95%, and the chloroplast genome exhibited a standard quadripartite structure, consisting of a large single-copy (LSC) region (82,884 bp), a small single-copy (SSC) region (8118 bp), and a pair of inverted repeats (IRs) regions (76,962 bp). A total of 112 genes were annotated from C. macrocalyx, including 78 protein-coding genes, 30 transfer RNA (tRNA) genes, and four ribosomal RNA (rRNA) genes. Additionally, 54 simple sequence repeats (SSRs) were detected, most of which were A/T monomeric sequences. Phylogenetic analyses showed that C. macrocalyx is clustered with C. flavus, suggesting a close relationship between the two species. This study provides a valuable resource for the genetics and evolution study of the Cyananthus.

## Linked entities

- **Species:** Cyananthus macrocalyx (taxon 858951), Cyananthus flavus (taxon 1334528)

## Full-text entities

- **Diseases:** rheumatic disorder (MESH:D012216), convulsion (MESH:D012640)
- **Chemicals:** OQ148741.1 (-), thymine (MESH:D013941), AT (MESH:D001246), GC (MESH:C057580), agarose (MESH:D012685), silica (MESH:D012822), adenine (MESH:D000225), CTAB (MESH:D000077286)
- **Species:** Campanula pallida (species) [taxon 1241138], Notholaena standleyi (species) [taxon 414630], Lobelia montana (species) [taxon 2010894], Wahlenbergia marginata (species) [taxon 942061], Pseudocodon convolvulaceus (species) [taxon 1392590], Codonopsis pilosula (species) [taxon 86864], Codonopsis minima (species) [taxon 1735385], Pseudocodon vinciflorus (species) [taxon 1392610], Lobelia doniana (species) [taxon 1715891], Codonopsis lanceolata (species) [taxon 103999], Cyananthus macrocalyx (species) [taxon 858951], Asyneuma japonicum (species) [taxon 103993]

## Full text

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## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12077473/full.md

## References

30 references — full list in the complete paper: https://tomesphere.com/paper/PMC12077473/full.md

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Source: https://tomesphere.com/paper/PMC12077473