# Single-cell transcriptomics and functional validation revealed PLEKHA5-L as a promoter of growth and migration in brain metastatic melanoma cells

**Authors:** Xiaogen Tang, Tingting Lei, Boya Huang, Guangjie Wu, Yizhen Tian, Jian Xiang, Dongwei Fu, Hongyi Zhang

PMC · DOI: 10.3389/fonc.2025.1560954 · Frontiers in Oncology · 2025-04-28

## TL;DR

This study identifies PLEKHA5-L as a key driver of growth and migration in melanoma cells that spread to the brain, suggesting it could be a new target for treatment.

## Contribution

The study identifies PLEKHA5-L as a novel promoter of brain metastasis in melanoma through single-cell transcriptomics and functional validation.

## Key findings

- PLEKHA5 expression is increased in brain metastatic melanoma at the single-cell level.
- PLEKHA5-L promotes melanoma migration and proliferation by upregulating oncogenes like HRAS and AKT3.
- PLEKHA5-L also increases PD-L1 and ABC transporters, which are linked to therapy resistance.

## Abstract

Melanoma brain metastasis is an lethal event. Investigating the molecules that potentially promoted melanoma metastasis is important for targeted therapy.

The transcriptional profiles of totaling 7 melanoma samples, including 4 primary and 3 brain metastatic tissues were studied on the single-cell RNA sequencing level, and the expression of PLEKHA5 was examined in tumor clusters. Then PLEKHA5 expression was validated in brain Metastatic model by left ventricular injections in nude mice. The functional effect of PLEKHA5 isoforms (Long or Short) on proliferation and migration of melanoma was studied by RNA interference, overexpression by lentivirus vector, CCK8 test, colony formation test, transwell chamber assay. The targets and signal pathways that was potentially regulated by PLEKHA5 was studied by RNA-sequencing.

PLEKHA5 expression increased in brain metastatic melanoma at single cell level. PLEKH5 was constantly upregulated in brain metastatic tissue of melanoma in animal model. PLEKHA5-L had the potential for melanoma migration and proliferation by upregulating oncogenes such as HRAS, AKT3 etc. PLEKHA5-L also upregulated expression of PD-L1 and ABC transporters that were associated with therapy resistant.

PLEKHA5-L was potential therapeutic target for metastatic melanoma.

## Linked entities

- **Genes:** PLEKHA5 (pleckstrin homology domain containing A5) [NCBI Gene 54477], HRAS (HRas proto-oncogene, GTPase) [NCBI Gene 3265], AKT3 (AKT serine/threonine kinase 3) [NCBI Gene 10000], CD274 (CD274 molecule) [NCBI Gene 29126]
- **Diseases:** melanoma (MONDO:0005105)

## Full-text entities

- **Genes:** Cd274 (CD274 antigen) [NCBI Gene 60533] {aka A530045L16Rik, B7h1, Pdcd1l1, Pdcd1lg1, Pdl1}, Plekha5 (pleckstrin homology domain containing, family A member 5) [NCBI Gene 109135] {aka 2810431N21Rik, AMH-Cre, Ayu21-9, Gt(pU21)9Imeg, Pepp2, Tg(AMH-cre)1Flor}, Hras (Hras proto-oncogene, GTPase) [NCBI Gene 15461] {aka H-ras, Ha-ras, Harvey-ras, Hras-1, Hras1, Kras2}, Akt3 (Akt serine/threonine kinase 3) [NCBI Gene 23797] {aka D930002M15Rik, Nmf350}
- **Diseases:** Melanoma (MESH:D008545), tumor (MESH:D009369), Metastatic (MESH:D000092182), melanoma metastasis (MESH:D009362)
- **Species:** Mus musculus (house mouse, species) [taxon 10090]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12066752/full.md

## References

20 references — full list in the complete paper: https://tomesphere.com/paper/PMC12066752/full.md

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Source: https://tomesphere.com/paper/PMC12066752