# Single-cell transcriptomic construction of fibroblast score for analysis of immune infiltration in primary and metastatic ovarian cancer

**Authors:** Qian Guo, Hongmei Ding, Qinlin Zheng

PMC · DOI: 10.3389/fgene.2025.1549541 · Frontiers in Genetics · 2025-04-28

## TL;DR

This study uses single-cell data to build a fibroblast score that predicts ovarian cancer prognosis and immune infiltration, revealing a key role for TIMP3 in tumor progression and drug resistance.

## Contribution

A novel fibroblast score based on five prognostic genes is developed to analyze immune infiltration and drug resistance in ovarian cancer.

## Key findings

- TIMP3 expression in fibroblasts correlates with poor prognosis, increased immune infiltration, and drug resistance in ovarian cancer.
- Fibroblasts communicate with macrophages via the TIMP3-regulated CXCL12/CXCR4 pathway, influencing tumor outcomes.
- A five-gene fibroblast score accurately predicts ovarian cancer patient prognosis.

## Abstract

Ovarian cancer (OV) is a malignant gynecologic cancer with poor clinical outcomes and poor prognosis. The aim of this study was to explore the immune infiltration between primary and metastatic ovarian cancer and the function of fibroblast differential marker in ovarian cancer immunomodulation.

Obtained single-cell transcriptome datasets of primary ovarian cancer and metastatic ovarian cancer, performed cell communication analysis and enrichment analysis. Constructed a new fibroblast score, constructed a prognostic model, screened for prognostically relevant fibroblast differential markers, and analyzed the role of differential markers in immune infiltration of ligand-receptor cells.

Single-cell data analysis of ovarian cancer revealed the existence of intercellular communication between fibroblasts and mononuclear macrophages. COX one-way analysis of 28 differential genes in ovarian cancer fibroblasts yielded five genes with prognostic significance for ovarian cancer, and a new Fib score constructed on the basis of these five genes accurately predicted the prognosis of ovarian cancer patients. Further analysis of these five genes revealed that TIMP3 in ovarian cancer fibroblasts affected tumor prognosis, immunosuppression, and drug resistance by targeting M2-type macrophages through the regulation of the CXCL12/CXCR4 signaling axis, which was specifically shown that the higher the expression of TIMP3, the worse the prognosis, the more significant the immune infiltration, and the more drug-resistant the ovarian cancer was.

In metastatic ovarian cancer, fibroblasts induce macrophage polarization through the TIMP3-regulated CXCL signaling pathway, which affects the prognosis of ovarian cancer patients and drug resistance of ovarian cancer cells.

## Linked entities

- **Genes:** TIMP3 (TIMP metallopeptidase inhibitor 3) [NCBI Gene 7078], CXCR4 (C-X-C motif chemokine receptor 4) [NCBI Gene 7852]
- **Diseases:** ovarian cancer (MONDO:0005140)

## Full-text entities

- **Genes:** CXCL12 (C-X-C motif chemokine ligand 12) [NCBI Gene 6387] {aka IRH, PBSF, SCYB12, SDF1, TLSF, TPAR1}, COX8A (cytochrome c oxidase subunit 8A) [NCBI Gene 1351] {aka COX, COX8, COX8-2, COX8L, MC4DN15, VIII}, CXCR4 (C-X-C motif chemokine receptor 4) [NCBI Gene 7852] {aka CD184, D2S201E, FB22, HM89, HSY3RR, LCR1}, TIMP3 (TIMP metallopeptidase inhibitor 3) [NCBI Gene 7078] {aka HSMRK222, K222, K222TA2, SFD}
- **Diseases:** gynecologic cancer (MESH:D009369), OV (MESH:D010051)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12066613/full.md

## References

34 references — full list in the complete paper: https://tomesphere.com/paper/PMC12066613/full.md

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Source: https://tomesphere.com/paper/PMC12066613