# Light-Mediated Population Dynamics of Picocyanobacteria Shaping the Diurnal Patterns of Microbial Communities in an Atoll Lagoon

**Authors:** Ying Yu, Maosen Shangguan, Ping Sun, Xiaofeng Lin, Jiqiu Li

PMC · DOI: 10.3390/microorganisms13040727 · 2025-03-24

## TL;DR

This study explores how daily light cycles affect microbial communities in a lagoon, revealing that light drives changes in cyanobacteria populations.

## Contribution

The study is the first to use flow cytometry and sequencing to investigate diurnal microbial dynamics in Zhubi lagoon.

## Key findings

- Picophytoplankton abundance and microbial community structures show clear diurnal variations.
- Light is the primary driver of diurnal fluctuations in picophytoplankton cell abundance.
- Changes in two dominant picocyanobacterial groups drive microbial community diversity shifts.

## Abstract

The diurnal cycle of light significantly impacts microbes, making diurnal investigations crucial for understanding microbial communities. Zhubi Reef is known to harbor exceptionally rich biodiversity, with both zooplankton and seawater properties demonstrating diurnal patterns. However, microbial community structures and their potential diurnal dynamics remain largely unexplored. This study is the first to utilize flow cytometry and high-throughput sequencing to investigate prokaryotic and microeukaryotic communities in the Zhubi lagoon, focusing on diurnal variations under different light intensities. The picophytoplankton cell abundance and the microbial community structures both exhibit clear diurnal variations. Light is identified as the primary driver of diurnal variations in the picophytoplankton cell abundance. The diurnal variation in microbial community diversity is driven by changes in the cell abundance of two dominant picocyanobacterial groups. Our findings reveal the diurnal variation in microbial community structures is mediated by the light-driven fluctuation of dominant cyanobacterial populations, and the diurnal variation patterns of specific populations may vary with habitats and sampling timepoints. This research provides valuable insights into the microbial community structure within the Zhubi lagoon.

## Full-text entities

- **Genes:** JTB (jumping translocation breakpoint) [NCBI Gene 10899] {aka HJTB, HSPC222, PAR, hJT}
- **Diseases:** injury to (MESH:D014947)
- **Chemicals:** Water (MESH:D014867), carbon (MESH:D002244), silicate (MESH:D017640), oxygen (MESH:D010100), P (MESH:D010758), phosphate (MESH:D010710), acid (MESH:D000143), glutaraldehyde (MESH:D005976), SYBR Green I (MESH:C098022), PP (MESH:D011126), chloroform (MESH:D002725), nitrite (MESH:D009573), acetone (MESH:D000096), NMDS (-)
- **Species:** Actinomycetota (actinobacteria, phylum) [taxon 201174], Psychrobacter sp. (species) [taxon 56811], Ochrophyta (clade) [taxon 2696291], Cyanobacteriota (blue-green algae, phylum) [taxon 1117], Pseudomonadota (proteobacteria, phylum) [taxon 1224], Bacillariophyceae (Raphid, pennate diatoms, class) [taxon 33849], Planctomycetota (phylum) [taxon 203682], Prochlorococcus (genus) [taxon 1218], Picozoa (phylum) [taxon 419944], Synechococcus (genus) [taxon 1129], Tetraselmis (genus) [taxon 3164], Homo sapiens (human, species) [taxon 9606], Dinophyceae (dinoflagellates, class) [taxon 2864]
- **Cell lines:** S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232)

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12029148/full.md

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Source: https://tomesphere.com/paper/PMC12029148