# B Cell Activating Factor Induces Drug Resistance in Hairy Cell Leukemia Variant

**Authors:** Claire Fritz, Daniel Feinberg, Akshaya Radhakrishnan, Kayla Klatt, E. Ricky Chan, Philip Rock, Richard Burack, Reshmi Parameswaran

PMC · DOI: 10.3390/biomedicines13040890 · Biomedicines · 2025-04-07

## TL;DR

This study shows that B-cell activating factor (BAFF) helps HCL-v cancer cells resist chemotherapy by activating survival pathways, suggesting that blocking BAFF could improve treatment outcomes.

## Contribution

The study identifies BAFF as a novel driver of chemoresistance in HCL-v and proposes BAFF blockade as a potential therapeutic strategy.

## Key findings

- BAFF activates the nonclassical NF-κB pathway in HCL-v cells, promoting survival and chemoresistance.
- BAFF upregulates genes like IL1, CXCL1/2, and PTGS2, which are linked to drug resistance in cancers.
- Exogenous BAFF protects HCL-v cells from cladribine-induced cell death in vitro.

## Abstract

Background: Chemoresistance is an existing challenge faced in the treatment of the hairy cell leukemia variant (HCL-v). Classical hairy cell leukemia (HCL-c) is very sensitive to the standard of care with purine nucleoside analogs (PNAs) cladribine (cDa) and pentostatin. However, almost half of these patients eventually become less sensitive to chemotherapy and relapse. HCL-variant (HCL-v) is a biologically distinct entity from HCL-c that is not sensitive to frontline PNA therapy, and this treatment is not recommended for these patients. To address these treatment challenges, we investigated the role of B-cell activating factor (BAFF) in promoting HCL-v cell chemoresistance. Methods: Flow cytometry and quantitative PCR were used to measure the levels of BAFF and its receptors. To determine BAFF activated pathways in HCL-c and HCL-v, the Bonna-12 HCL-c cell line or HCL-v patient-derived cancer cells were stimulated with recombinat BAFF and activation of common BAFF-activated pathways, including the nonclassical nuclear factor kappa B (NF-κB) pathway, the Extracellular Signal-Regulated Kinase (Erk) and phosphatidylinositol-3 (PI-3) kinase (PI3K)/AKT serine/threonine kinase (AKT) pathways were measured by western blotting. To test whether BAFF signaling promotes chemoresistance in HCL-v, we stimulated patient-derived HCL-v cells with BAFF and performed RNA sequencing. Lastly, to confirm the functional implications of BAFF signaling in HCL-v, we treated patient-derived HCL-v cells with exogenous BAFF before treatment with cladribine. Results: We found that HCL-v patient-derived cancer cells express receptors of BAFF at varying degrees and express relatively lower levels of membrane-bound BAFF ligand expression. BAFF stimulation of these cells resulted in substantial activation of the nonclassical NF-κB pathway, which is known to promote anti-apoptotic and pro-survival effects in B-cell cancers. Conversely, in the Bonna-12 cell line, we observed constitutive activation of the nonclassical NF-κB pathway. Through RNA sequencing, we found that BAFF upregulates a myriad of genes that are known to promote chemoresistance in various cancers, including IL1, CXCL1/2, CXCL5, CXCL8, TRAF3, and PTGS2. Lastly, we found that BAFF protects these cells from cladribine-induced cell death in vitro. Conclusions: We conclude that BAFF provides chemo-protection in HCL-v cells by activating nonclassical NF-κB signaling, which results in the upregulation of multiple pro-survival or anti-apoptotic genes. Our results highlight an important role of BAFF in HCL-v resistance to chemotherapy and suggest that the BAFF blockade may enhance the chemosensitivity to PNAs in drug-resistant HCL-v patients.

## Linked entities

- **Genes:** IL1A (interleukin 1 alpha) [NCBI Gene 3552], CXCL1 (C-X-C motif chemokine ligand 1) [NCBI Gene 2919], CXCL2 (C-X-C motif chemokine ligand 2) [NCBI Gene 2920], CXCL5 (C-X-C motif chemokine ligand 5) [NCBI Gene 6374], CXCL8 (C-X-C motif chemokine ligand 8) [NCBI Gene 3576], TRAF3 (TNF receptor associated factor 3) [NCBI Gene 7187], PTGS2 (prostaglandin-endoperoxide synthase 2) [NCBI Gene 5743], NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790]
- **Proteins:** TNFSF13B (TNF superfamily member 13b), EPHB2 (EPH receptor B2), PIK3CA (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha), AKT1 (AKT serine/threonine kinase 1), TRAF3 (TNF receptor associated factor 3), PTGS2 (prostaglandin-endoperoxide synthase 2)
- **Chemicals:** cladribine (PubChem CID 20279), pentostatin (PubChem CID 439693)
- **Diseases:** hairy cell leukemia variant (MONDO:0017600), hairy cell leukemia (MONDO:0018935)

## Full-text entities

- **Genes:** AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, IL1A (interleukin 1 alpha) [NCBI Gene 3552] {aka IL-1 alpha, IL-1A, IL1, IL1-ALPHA, IL1F1}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, CXCL8 (C-X-C motif chemokine ligand 8) [NCBI Gene 3576] {aka GCP-1, GCP1, IL8, LECT, LUCT, LYNAP}, TNFSF13B (TNF superfamily member 13b) [NCBI Gene 10673] {aka BAFF, BLYS, CD257, TALL-1, TALL1, THANK}, TRAF3 (TNF receptor associated factor 3) [NCBI Gene 7187] {aka CAP-1, CD40bp, CRAF1, IIAE5, IMD132A, IMD132B}, CXCL12 (C-X-C motif chemokine ligand 12) [NCBI Gene 6387] {aka IRH, PBSF, SCYB12, SDF1, TLSF, TPAR1}, CXCL5 (C-X-C motif chemokine ligand 5) [NCBI Gene 6374] {aka ENA-78, SCYB5}, PTGS2 (prostaglandin-endoperoxide synthase 2) [NCBI Gene 5743] {aka COX-2, COX2, GRIPGHS, PGG/HS, PGHS-2, PHS-2}
- **Diseases:** Classical hairy cell leukemia (MESH:D007943), B-cell cancers (MESH:D002292), cancer (MESH:D009369), HCL-c (MESH:D030401)
- **Chemicals:** cDa (MESH:D017338), PNA (-), pentostatin (MESH:D015649), purine nucleoside (MESH:D011684)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** HCL-c — Homo sapiens (Human), Cutis laxa, Finite cell line (CVCL_9V72), HCL-v — Homo sapiens (Human), Hairy cell leukemia variant, Cancer cell line (CVCL_EI72), Bonna-12 — Homo sapiens (Human), Hairy cell leukemia, Cancer cell line (CVCL_1090)

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12025152/full.md

## References

62 references — full list in the complete paper: https://tomesphere.com/paper/PMC12025152/full.md

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Source: https://tomesphere.com/paper/PMC12025152